CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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hdx
(
Oryzias latipes
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSORLG00000008466
T213901_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HDX
M01246_2.00
Homo sapiens
HNNNNNN
NNNNNND
PBM
Lambert et al.(2019)
pTH11271
0.677
0.736
Hdx
M00463_2.00
Mus musculus
HNWYHNN
NNDRWND
PBM
Berger et al.(2008)
Hdx_3845
0.677
0.736
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSORLP00000010633
Homeodomain
2
59
NLRSVFTAEQQRILERYYDNGMTNQSKACFQLILHCAQEAKLDFSVVRTWVGNKRRKL
ENSORLP00000010633
Homeodomain
425
484
QDRTQFSDGDLVQLKRYWDRGMTSLGSVCREKIAAAANQLNVDTEIVKTWISNRRRKYRL
Links
Other
Homeodomain
family TFs
Other
Oryzias latipes
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000007308
Ailuropoda melanoleuca
ENSAMEG00000007308
N
ENSBTAP00000008736-D1
Bos grunniens
ENSBTAP00000008736-D1
N
ENSCSAG00000005742
Chlorocebus sabaeus
ENSCSAG00000005742
N
ENSMEUG00000007495
Macropus eugenii
ENSMEUG00000007495
N
ENSMPUG00000011656
Mustela putorius furo
ENSMPUG00000011656
N
ENSP00000378434
Macaca fascicularis
ENSP00000378434
N
ENSPANG00000011918
Papio anubis
ENSPANG00000011918
N
ENSPPYG00000007302
Pongo abelii
ENSPPYG00000007302
N
ENSSTOG00000025891
Ictidomys tridecemlineatus
ENSSTOG00000025891
N
Zfp668
Mus musculus
ENSMUSG00000049728
N
Zfp668
Rattus norvegicus
ENSRNOG00000016683
N
Zfp668
Dipodomys ordii
ENSDORG00000002985
N
ZNF668
Pan troglodytes
ENSPTRG00000008028
N
ZNF668
Procavia capensis
ENSPCAG00000007274
N
ZNF668
Sus scrofa
ENSSSCG00000007767
N
ZNF668
Tupaia belangeri
ENSTBEG00000010850
N
ZNF668
Tursiops truncatus
ENSTTRG00000015533
N
ZNF668
Macaca mulatta
ENSMMUG00000011867
N
ZNF668
Ochotona princeps
ENSOPRG00000010912
N
ZNF668
Myotis lucifugus
ENSMLUG00000007172
N
ZNF668
Microcebus murinus
ENSMICG00000001610
N
ZNF668
Gorilla gorilla
ENSGGOG00000028088
N
ZNF668
Homo sapiens
ENSG00000167394
N
ZNF668
Felis catus
ENSFCAG00000008954
N
ZNF668
Dasypus novemcinctus
ENSDNOG00000035317
N
ZNF668
Cavia porcellus
ENSCPOG00000026412
N
ZNF668
Callithrix jacchus
ENSCJAG00000003078
N
ZNF668
Choloepus hoffmanni
ENSCHOG00000002070
N
ZNF668
Canis familiaris
ENSCAFG00000016612
N
ZNF668
Bos taurus
ENSBTAG00000006650
N