pdm3 (Drosophila melanogaster)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00157 (Pou) IPR000327 FBgn0261588 T218409_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
pdm3
M02127_2.00		 Drosophila melanogaster
CTAATTAN
NTAATTAG		 PBM
Weirauch et al.(2014)
pTH6769		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
POU6F1
M02094_2.00 		Homo sapiens
VNTAATTANB
VNTAATTANB		 PBM
Weirauch et al.(2014)
pTH6519 		0.703 0.684
For this family, TFs with SR scores > 0.599 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02127_2.00 Homeodomain 1 57

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0292044 POU 813 902
FBpp0292044 Homeodomain 928 984
FBpp0292045 POU 1110 1199
FBpp0292045 Homeodomain 1225 1281
FBpp0308445 POU 1110 1181
FBpp0308445 Homeodomain 1207 1263
FBpp0308446 Homeodomain 1226 1282

Links

Other Homeodomain family TFs
Other Drosophila melanogaster TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0000008501 Angiostrongylus cantonensis ACAC_0000008501 N 0.000
ACOC_0000493901 Angiostrongylus costaricensis ACOC_0000493901 N 0.000
ALUE_0000347301 Ascaris lumbricoides ALUE_0000347301 N 0.000
ANCCAN_14716 Ancylostoma caninum ANCCAN_14716 N 0.000
ANCCEY_13935 Ancylostoma ceylanicum ANCCEY_13935 N 0.000
ASIM_0001085501 Anisakis simplex ASIM_0001085501 N 0.000
ASU_10686 Ascaris suum ASU_10686 N 0.000
Bm6679 Brugia malayi Bm6679 N 0.000
CBG08484 Caenorhabditis briggsae CBG08484 N 0.000
CBN22200 Caenorhabditis brenneri CBN22200 N 0.000
CRE28107 Caenorhabditis remanei CRE28107 N 0.000
D918_02299 Trichuris suis D918_02299 N 0.000
DICVIV_02142 Dictyocaulus viviparus DICVIV_02142 N 0.000
DME_0000295201 Dracunculus medinensis DME_0000295201 N 0.000
EEL_0000257001 Elaeophora elaphi EEL_0000257001 N 0.000
GPUH_0000076201 Gongylonema pulchrum GPUH_0000076201 N 0.000
grh-1 Caenorhabditis elegans WBGene00001707 N 0.000
HPLM_0001248301 Haemonchus placei HPLM_0001248301 N 0.000
LOAG_15534 Loa loa LOAG_15534 N 0.000
MhA1_Contig3342.frz3.fgene1 Meloidogyne hapla MhA1_Contig3342.frz3.fgene1 I 0.000
nAv.1.0.1.g04294 Acanthocheilonema viteae nAv.1.0.1.g04294 N 0.000
NBR_0001111401 Nippostrongylus brasiliensis NBR_0001111401 I 0.000
nDi.2.2.2.g12190 Dirofilaria immitis nDi.2.2.2.g12190 N 0.000
nDi.2.2.2.g12300 Dirofilaria immitis nDi.2.2.2.g12300 I 0.000
NECAME_01451 Necator americanus NECAME_01451 N 0.000
nLs.2.1.2.g09328 Litomosoides sigmodontis nLs.2.1.2.g09328 N 0.000
nOo.2.0.1.g10305 Onchocerca ochengi nOo.2.0.1.g10305 N 0.000
nOo.2.0.1.g10313 Onchocerca ochengi nOo.2.0.1.g10313 N 0.000
nOo.2.0.1.g11935 Onchocerca ochengi nOo.2.0.1.g11935 N 0.000
PEQ_0000501101 Parascaris equorum PEQ_0000501101 N 0.000
PTRK_0001384100 Parastrongyloides trichosuri PTRK_0001384100 N 0.000
SMUV_0000990001 Syphacia muris SMUV_0000990001 N 0.000
SPAL_0001441800 Strongyloides papillosus SPAL_0001441800 N 0.000
SSTP_0000594700 Strongyloides stercoralis SSTP_0000594700 N 0.000
TCNE_0000897001 Toxocara canis TCNE_0000897001 N 0.000
TELCIR_08176 Teladorsagia circumcincta TELCIR_08176 N 0.000
TMUE_s0024003700 Trichuris muris TMUE_s0024003700 N 0.000
TMUE_s0040003800 Trichuris muris TMUE_s0040003800 N 0.000
TTRE_0000249401 Trichuris trichiura TTRE_0000249401 N 0.000
TTRE_0000375101 Trichuris trichiura TTRE_0000375101 N 0.000