GLYMA04G03160 (Glycine max)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 GLYMA04G03160 T218741_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.818 0.702
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.626 0.596
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.606 0.447
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.606 0.447
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.606 0.447
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.606 0.447
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA04G03160.2 Homeodomain 270 319

Links

Other Homeodomain family TFs
Other Glycine max TFs

1011 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CY34DRAFT_590075 Suillus luteus CY34DRAFT_590075 I 0.000
FOMPIDRAFT_1127908 Fomitopsis pinicola FOMPIDRAFT_1127908 N 0.000
GLOTRDRAFT_137651 Gloeophyllum trabeum GLOTRDRAFT_137651 N 0.000
gw1.1.790.1 Sporobolomyces roseus gw1.1.790.1 N 0.000
MELLADRAFT_118331 Melampsora laricipopulina MELLADRAFT_118331 I 0.000
MVLG_05637 Microbotryum violaceum MVLG_05637 N 0.000
PAXRUDRAFT_830673 Paxillus rubicundulus PAXRUDRAFT_830673 I 0.000
RHTO_04446 Rhodosporidium toruloides RHTO_04446 N 0.000
SERLA73DRAFT_72478 Serpula lacrymans SERLA73DRAFT_72478 I 0.000