CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw1.1.790.1
(
Sporobolomyces roseus
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
gw1.1.790.1
T390489_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.1.790.1
Zinc cluster
12
52
RACAACQKAHLTCDDGRPCKRCIKKGCPEECIDGARKKAKY
Links
Other
Zinc cluster
family TFs
Other
Sporobolomyces roseus
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RHTO_04446
Rhodosporidium toruloides
RHTO_04446
N
0.612
MVLG_05637
Microbotryum violaceum
MVLG_05637
N
0.602
PAXRUDRAFT_830673
Paxillus rubicundulus
PAXRUDRAFT_830673
I
0.597
SERLA73DRAFT_72478
Serpula lacrymans
SERLA73DRAFT_72478
I
0.597
CY34DRAFT_590075
Suillus luteus
CY34DRAFT_590075
I
0.572
FOMPIDRAFT_1127908
Fomitopsis pinicola
FOMPIDRAFT_1127908
N
0.572
DACRYDRAFT_20822
Dacryopinax sp
DACRYDRAFT_20822
I
0.565
BOTBODRAFT_25699
Botryobasidium botryosum
BOTBODRAFT_25699
N
0.555
MELLADRAFT_118331
Melampsora laricipopulina
MELLADRAFT_118331
I
0.555
M404DRAFT_15475
Pisolithus tinctorius
M404DRAFT_15475
N
0.554
PISMIDRAFT_7910
Pisolithus microcarpus
PISMIDRAFT_7910
N
0.554
SCLCIDRAFT_1208446
Scleroderma citrinum
SCLCIDRAFT_1208446
N
0.554