ISCW020504 (Ixodes scapularis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ISCW020504 T219731_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.699 0.442
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.699 0.442
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.699 0.442
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.696 0.279
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.696 0.279
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.696 0.279
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.696 0.279
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.696 0.279
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.696 0.279
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.696 0.279
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.696 0.279
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.696 0.279
Dll
M02112_2.00 		Drosophila melanogaster
NVTAATTANN
NNTAATTABN		 PBM
Weirauch et al.(2014)
pTH5506 		0.326 1.000
Dll
M03777_2.00 		Drosophila melanogaster
NTAATTRN
NYAATTAN		 SELEX
Nitta et al.(2015)
Dll_1 		0.326 1.000
Dll
M03778_2.00 		Drosophila melanogaster
NTAATTRN
NYAATTAN		 SELEX
Nitta et al.(2015)
Dll_2 		0.326 1.000
Dll
M06479_2.00 		Drosophila melanogaster
TAATTDB
VHAATTA		 B1H
Mathelier et al.(2014)
MA0187.1 		0.326 1.000
Dll
M06217_2.00 		Drosophila melanogaster
TAATTDB
VHAATTA		 B1H
Zhu et al.(2011)
Dll_Cell_FBgn0000157 		0.326 1.000
Dll
M06218_2.00 		Drosophila melanogaster
TAATKR
YMATTA		 B1H
Zhu et al.(2011)
Dll_SOLEXA_FBgn0000157 		0.326 1.000
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ISCW020504-PA Homeodomain 170 212

Links

Other Homeodomain family TFs
Other Ixodes scapularis TFs

1249 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG017936.1 Alligator sinensis Alligator_sinensis_CCG017936.1 I 0.000
Cmyd_10005916 Chelonia mydas Cmyd_10005916 I 0.000
ENSACAG00000016965 Anolis carolinensis ENSACAG00000016965 I 0.000
ENSAMEG00000010478 Ailuropoda melanoleuca ENSAMEG00000010478 I 0.000
ENSAMXG00000005448 Astyanax mexicanus ENSAMXG00000005448 I 0.000
ENSCSAG00000006753 Chlorocebus sabaeus ENSCSAG00000006753 I 0.000
ENSMMUP00000027145 Macaca fascicularis ENSMMUP00000027145 I 0.000
ENSMPUG00000005002 Mustela putorius furo ENSMPUG00000005002 I 0.000
ENSNLEG00000012591 Nomascus leucogenys ENSNLEG00000012591 I 0.000
ENSOANG00000012102 Ornithorhynchus anatinus ENSOANG00000012102 I 0.000
ENSONIG00000008038 Oreochromis niloticus ENSONIG00000008038 I 0.000
ENSPANG00000016446 Papio anubis ENSPANG00000016446 I 0.000
ENSPFOG00000003530 Poecilia formosa ENSPFOG00000003530 I 0.000
ENSPPYG00000009584 Pongo abelii ENSPPYG00000009584 I 0.000
ENSSTOG00000003640 Ictidomys tridecemlineatus ENSSTOG00000003640 I 0.000
Myotis_brandtii_Znf653_10003855 Myotis brandtii Myotis_brandtii_Znf653_10003855 I 0.000
Ogr06398 Ophisaurus gracilis Ogr06398 I 0.000
Pvit_14576 Pogona vitticeps Pvit_14576 I 0.000
Zfp653 Mus musculus ENSMUSG00000038895 I 0.000
Zfp653 Rattus norvegicus ENSRNOG00000014065 I 0.000
ZNF653 Pan troglodytes ENSPTRG00000010507 I 0.000
ZNF653 Bos taurus ENSBTAG00000014415 I 0.000
ZNF653 Canis familiaris ENSCAFG00000031712 I 0.000
ZNF653 Callithrix jacchus ENSCJAG00000005551 I 0.000
ZNF653 Tursiops truncatus ENSTTRG00000001794 I 0.000
ZNF653 Sus scrofa ENSSSCG00000013616 I 0.000
ZNF653 Pteropus vampyrus ENSPVAG00000014895 I 0.000
ZNF653 Myotis lucifugus ENSMLUG00000016337 I 0.000
znf653 Oryzias latipes ENSORLG00000016563 I 0.000
ZNF653 Cavia porcellus ENSCPOG00000010842 I 0.000
ZNF653 Otolemur garnettii ENSOGAG00000007074 I 0.000
znf653 Danio rerio ENSDARG00000093469 I 0.000
ZNF653 Felis catus ENSFCAG00000004922 I 0.000
ZNF653 Homo sapiens ENSG00000161914 D 0.000