CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-pag1_scaffold_106-fgenesh-gene-0.12
(
Pythium aphanidermatum
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
maker-pag1_scaffold_106-fgenesh-gene-0.12
T220395_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPA00000016626
Homeodomain
293
359
SRLYSAKQIQKLEEWYQKSSRPESSEIQAMYRIINSPEYADKELQPDGISVKQIRIWFDNRRAKERL
EPrPA00000016626
Homeodomain
661
730
RKSRVKFSREQLMKLERHFHKEDTPSKKNLEKLSKKLNDIATRDPSCEGQDKIDYKQIRSWFYKRRSTNQ
EPrPA00000016626
Homeodomain
831
899
SGRIFNVKQLATIIEEYEKNPRPSVARLEELQRILNQDDHADENFANPLGVTKRQIKTWFSNRRAKERL
Links
Other
Homeodomain
family TFs
Other
Pythium aphanidermatum
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F443_02263
Phytophthora parasitica
F443_02263
N
fgenesh-pir_contig_40-abinit-gene-0.164
Pythium irregulare
fgenesh-pir_contig_40-abinit-gene-0.164
N
fgenesh_scip_prom.46568.784
Phytophthora kernoviae
fgenesh_scip_prom.46568.784
N
HpaG809245
Hyaloperonospora arabidopsidis
HpaG809245
N
maker-pag1_scaffold_166-fgenesh-gene-0.7
Pythium aphanidermatum
maker-pag1_scaffold_166-fgenesh-gene-0.7
N
maker-par_contig_347-fgenesh-gene-0.7
Pythium arrhenomanes
maker-par_contig_347-fgenesh-gene-0.7
N
maker-pve_contig_963-fgenesh-gene-0.1
Pythium vexans
maker-pve_contig_963-fgenesh-gene-0.1
N
Phyra74608
Phytophthora ramorum
Phyra74608
N
Physo138847
Phytophthora sojae
Physo138847
N
PYU1_G014436
Pythium ultimum
PYU1_G014436
N
SPRG_05187
Saprolegnia parasitica
SPRG_05187
N