CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-pag1_scaffold_106-fgenesh-gene-0.12
(
Pythium aphanidermatum
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
maker-pag1_scaffold_106-fgenesh-gene-0.12
T220395_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPA00000016626
Homeodomain
293
359
SRLYSAKQIQKLEEWYQKSSRPESSEIQAMYRIINSPEYADKELQPDGISVKQIRIWFDNRRAKERL
EPrPA00000016626
Homeodomain
661
730
RKSRVKFSREQLMKLERHFHKEDTPSKKNLEKLSKKLNDIATRDPSCEGQDKIDYKQIRSWFYKRRSTNQ
EPrPA00000016626
Homeodomain
831
899
SGRIFNVKQLATIIEEYEKNPRPSVARLEELQRILNQDDHADENFANPLGVTKRQIKTWFSNRRAKERL
Links
Other
Homeodomain
family TFs
Other
Pythium aphanidermatum
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
maker-par_contig_313-fgenesh-gene-0.2
Pythium arrhenomanes
maker-par_contig_313-fgenesh-gene-0.2
N
0.866
maker-pir_contig_264-snap-gene-0.19
Pythium irregulare
maker-pir_contig_264-snap-gene-0.19
N
0.821
PYU1_G014859
Pythium ultimum
PYU1_G014859
N
0.811
F443_09674
Phytophthora parasitica
F443_09674
N
0.810
Physo134456
Phytophthora sojae
Physo134456
N
0.810
maker-piw_contig_1064-fgenesh-gene-0.2
Pythium iwayamai
maker-piw_contig_1064-fgenesh-gene-0.2
N
0.808
PITG_19220
Phytophthora infestans
PITG_19220
N
0.807
fgenesh_scip_prom.28083.7556
Phytophthora lateralis
fgenesh_scip_prom.28083.7556
N
0.803
Phyra85385
Phytophthora ramorum
Phyra85385
N
0.803
HpaG807764
Hyaloperonospora arabidopsidis
HpaG807764
N
0.787
SPRG_07821
Saprolegnia parasitica
SPRG_07821
N
0.676
maker-pve_contig_7-fgenesh-gene-0.20
Pythium vexans
maker-pve_contig_7-fgenesh-gene-0.20
N
0.642