CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PITG_19220
(
Phytophthora infestans
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
PITG_19220
T222427_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PITG_19220T0
Homeodomain
524
590
SRLYSSKQIQKLEEWYQRSSRPESSEIHSMYRIINCPDYADPELQPEGISVKQIRIWFDNRRAKERL
PITG_19220T0
Homeodomain
887
957
RRPRVKFSLAQLVKLEKYFHKEDTPSKKKLDKIAARLNTIASSDPSSDAAQRSIDYKQIRCWFYKRRSANQ
PITG_19220T0
Homeodomain
1059
1127
GRIFNVKQLATIIEEYEKNPRPTMARLEELLKVLNQDDHTDEYNGGNVLGVTKQQIKTWFSNRRAKERL
Links
Other
Homeodomain
family TFs
Other
Phytophthora infestans
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F443_09674
Phytophthora parasitica
F443_09674
N
0.863
Physo134456
Phytophthora sojae
Physo134456
N
0.862
fgenesh_scip_prom.28083.7556
Phytophthora lateralis
fgenesh_scip_prom.28083.7556
N
0.855
Phyra85385
Phytophthora ramorum
Phyra85385
N
0.855
HpaG807764
Hyaloperonospora arabidopsidis
HpaG807764
N
0.837
maker-pir_contig_264-snap-gene-0.19
Pythium irregulare
maker-pir_contig_264-snap-gene-0.19
N
0.812
maker-pag1_scaffold_106-fgenesh-gene-0.12
Pythium aphanidermatum
maker-pag1_scaffold_106-fgenesh-gene-0.12
N
0.807
maker-par_contig_313-fgenesh-gene-0.2
Pythium arrhenomanes
maker-par_contig_313-fgenesh-gene-0.2
N
0.806
maker-piw_contig_1064-fgenesh-gene-0.2
Pythium iwayamai
maker-piw_contig_1064-fgenesh-gene-0.2
N
0.802
PYU1_G014859
Pythium ultimum
PYU1_G014859
N
0.802
SPRG_07821
Saprolegnia parasitica
SPRG_07821
N
0.696
maker-pve_contig_7-fgenesh-gene-0.20
Pythium vexans
maker-pve_contig_7-fgenesh-gene-0.20
N
0.659