CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MELLADRAFT_90168
(
Melampsora laricipopulina
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
MELLADRAFT_90168
T220535_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EGG03504
Homeodomain
147
181
SYLFPTKEELMELSGQTKLSAKQVDLWFRNARTRS
Links
Other
Homeodomain
family TFs
Other
Melampsora laricipopulina
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29729.m002278
Ricinus communis
29729.m002278
I
30169.m006340
Ricinus communis
30169.m006340
I
Aquca_030_00227
Aquilegia coerulea
Aquca_030_00227
I
Aquca_118_00035
Aquilegia coerulea
Aquca_118_00035
I
ASL5
Arabidopsis lyrata
fgenesh2_kg.4__983__AT2G30130.1
I
ASL5
Vitis vinifera
VIT_06s0004g07200
I
BGIOSGA013249
Oryza indica
BGIOSGA013249
I
BGIOSGA018244
Oryza indica
BGIOSGA018244
I
BGIOSGA018245
Oryza indica
BGIOSGA018245
I
BGIOSGA036857
Oryza indica
BGIOSGA036857
I
Bo3g024350
Brassica oleracea
Bo3g024350
I
Bo4g059700
Brassica oleracea
Bo4g059700
I
Bo4g170770
Brassica oleracea
Bo4g170770
I
Bo7g041000
Brassica oleracea
Bo7g041000
I
Bostr.15697s0446
Boechera stricta
Bostr.15697s0446
I
Bostr.29246s0022
Boechera stricta
Bostr.29246s0022
I
Bra014907
Brassica rapa
Bra014907
I
Bra018335
Brassica rapa
Bra018335
I
Bra021612
Brassica rapa
Bra021612
I
Bra022780
Brassica rapa
Bra022780
I
BRADI4G44850
Brachypodium distachyon
BRADI4G44850
I
Cagra.1508s0061
Capsella grandiflora
Cagra.1508s0061
I
Carubv10010462m.g
Capsella rubella
Carubv10010462m.g
I
Carubv10025543m.g
Capsella rubella
Carubv10025543m.g
I
cassava20471.m1
Manihot esculenta
cassava20471.m1
I
cassava20865.m1
Manihot esculenta
cassava20865.m1
I
cassava26200.m1
Manihot esculenta
cassava26200.m1
I
cassava27818.m1
Manihot esculenta
cassava27818.m1
I
cassava2872.m1
Manihot esculenta
cassava2872.m1
I
cassava30732.valid.m1
Manihot esculenta
cassava30732.valid.m1
I
Ca_06548
Cicer arietinum
Ca_06548
I
Ca_08998
Cicer arietinum
Ca_08998
I
Ca_12450
Cicer arietinum
Ca_12450
I
Ca_13388
Cicer arietinum
Ca_13388
I
Ca_13575
Cicer arietinum
Ca_13575
I
chr3.CM0176.110.nc
Lotus japonicus
chr3.CM0176.110.nc
I
chr4.CM0229.130.nc
Lotus japonicus
chr4.CM0229.130.nc
I
chr6.CM0738.260.nd
Lotus japonicus
chr6.CM0738.260.nd
I
Ciclev10006113m.g
Citrus clementina
Ciclev10006113m.g
I
Ciclev10016993m.g
Citrus clementina
Ciclev10016993m.g
I
Ciclev10029962m.g
Citrus clementina
Ciclev10029962m.g
I
Ciclev10032929m.g
Citrus clementina
Ciclev10032929m.g
I
Cla007354
Citrullus lanatus
Cla007354
I
Cla009336
Citrullus lanatus
Cla009336
I
Cla013598
Citrullus lanatus
Cla013598
I
Cla013678
Citrullus lanatus
Cla013678
I
Cucsa.118370
Cucumis sativus
Cucsa.118370
I
Cucsa.144430
Cucumis sativus
Cucsa.144430
I
Cucsa.236600
Cucumis sativus
Cucsa.236600
I
Eucgr.B03991
Eucalyptus grandis
Eucgr.B03991
I
Eucgr.E02016
Eucalyptus grandis
Eucgr.E02016
I
Eucgr.F04424
Eucalyptus grandis
Eucgr.F04424
I
Eucgr.G03089
Eucalyptus grandis
Eucgr.G03089
I
Eucgr.J00175
Eucalyptus grandis
Eucgr.J00175
I
evm.TU.supercontig_19.133
Carica papaya
evm.TU.supercontig_19.133
I
evm.TU.supercontig_192.6
Carica papaya
evm.TU.supercontig_192.6
I
evm.TU.supercontig_2.374
Carica papaya
evm.TU.supercontig_2.374
I
evm.TU.supercontig_331.6
Carica papaya
evm.TU.supercontig_331.6
I
F775_08326
Aegilops tauschii
F775_08326
I
F775_24149
Aegilops tauschii
F775_24149
I
gene20083-v1.0-hybrid
Fragaria vesca
gene20083-v1.0-hybrid
I
gene21039-v1.0-hybrid
Fragaria vesca
gene21039-v1.0-hybrid
I
gene28202-v1.0-hybrid
Fragaria vesca
gene28202-v1.0-hybrid
I
gene30046-v1.0-hybrid
Fragaria vesca
gene30046-v1.0-hybrid
I
GLYMA02G43030
Glycine max
GLYMA02G43030
I
GLYMA07G35000
Glycine max
GLYMA07G35000
I
GLYMA08G17990
Glycine max
GLYMA08G17990
I
GLYMA09G02510
Glycine max
GLYMA09G02510
I
GLYMA11G29450
Glycine max
GLYMA11G29450
I
GLYMA14G06140
Glycine max
GLYMA14G06140
I
GLYMA15G13410
Glycine max
GLYMA15G13410
I
GLYMA15G41020
Glycine max
GLYMA15G41020
I
GLYMA18G02780
Glycine max
GLYMA18G02780
I
GLYMA18G06530
Glycine max
GLYMA18G06530
I
GLYMA20G02850
Glycine max
GLYMA20G02850
I
Gorai.002G104500
Gossypium raimondii
Gorai.002G104500
I
Gorai.003G149600
Gossypium raimondii
Gorai.003G149600
I
Gorai.004G234100
Gossypium raimondii
Gorai.004G234100
I
Gorai.009G149900
Gossypium raimondii
Gorai.009G149900
I
Gorai.010G170700
Gossypium raimondii
Gorai.010G170700
I
Gorai.010G195100
Gossypium raimondii
Gorai.010G195100
I
Gorai.011G051200
Gossypium raimondii
Gorai.011G051200
I
Gorai.011G290800
Gossypium raimondii
Gorai.011G290800
I
GRMZM2G025989
Zea mays
GRMZM2G025989
I
GRMZM2G044150
Zea mays
GRMZM2G044150
I
GRMZM2G079185
Zea mays
GRMZM2G079185
I
GSMUA_Achr10G13050_001
Musa acuminata
GSMUA_Achr10G13050_001
I
GSMUA_Achr10G14880_001
Musa acuminata
GSMUA_Achr10G14880_001
I
GSMUA_Achr2G13170_001
Musa acuminata
GSMUA_Achr2G13170_001
I
GSMUA_Achr3G10050_001
Musa acuminata
GSMUA_Achr3G10050_001
I
GSMUA_Achr5G29470_001
Musa acuminata
GSMUA_Achr5G29470_001
I
GSMUA_Achr6G15660_001
Musa acuminata
GSMUA_Achr6G15660_001
I
GSMUA_Achr8G02800_001
Musa acuminata
GSMUA_Achr8G02800_001
I
GSMUA_Achr9G18030_001
Musa acuminata
GSMUA_Achr9G18030_001
I
gw1.238.28.1
Physcomitrella patens
gw1.238.28.1
D
gw1.66.118.1
Physcomitrella patens
gw1.66.118.1
I
LBD12
Arabidopsis thaliana
AT2G30130
I
LBD3
Vitis vinifera
VIT_19s0027g01120
I
LBD4
Arabidopsis thaliana
AT1G31320
D
LBD4
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1002773
I
LBD4
Vitis vinifera
VIT_00s0125g00290
I
LjSGA_062507.1.1
Lotus japonicus
LjSGA_062507.1.1
I
LPERR03G23450
Leersia perrieri
LPERR03G23450
I
LPERR05G10020
Leersia perrieri
LPERR05G10020
I
LPERR11G00440
Leersia perrieri
LPERR11G00440
I
LPERR12G00030
Leersia perrieri
LPERR12G00030
I
Lus10007525.g
Linum usitatissimum
Lus10007525.g
I
Lus10017431.g
Linum usitatissimum
Lus10017431.g
I
Lus10018275.g
Linum usitatissimum
Lus10018275.g
I
Lus10031191.g
Linum usitatissimum
Lus10031191.g
I
Lus10031285.g
Linum usitatissimum
Lus10031285.g
I
Lus10031769.g
Linum usitatissimum
Lus10031769.g
I
Lus10031855.g
Linum usitatissimum
Lus10031855.g
I
Lus10040638.g
Linum usitatissimum
Lus10040638.g
I
MDP0000121203
Malus domestica
MDP0000121203
I
MDP0000155138
Malus domestica
MDP0000155138
I
MDP0000194766
Malus domestica
MDP0000194766
I
MDP0000265429
Malus domestica
MDP0000265429
I
MDP0000268890
Malus domestica
MDP0000268890
I
MDP0000284409
Malus domestica
MDP0000284409
I
MDP0000861160
Malus domestica
MDP0000861160
I
mgf018189m
Mimulus guttatus
mgf018189m
I
mgf019461m
Mimulus guttatus
mgf019461m
I
mgf026046m
Mimulus guttatus
mgf026046m
I
MLOC_5148
Hordeum vulgare
MLOC_5148
I
MLOC_54949
Hordeum vulgare
MLOC_54949
I
MTR_2g068760
Medicago truncatula
MTR_2g068760
I
MTR_3g031660
Medicago truncatula
MTR_3g031660
I
MTR_3g071590
Medicago truncatula
MTR_3g071590
I
MTR_4g083680
Medicago truncatula
MTR_4g083680
I
MTR_5g083230
Medicago truncatula
MTR_5g083230
I
OB05G20740
Oryza brachyantha
OB05G20740
I
OB11G10200
Oryza brachyantha
OB11G10200
I
OB12G10480
Oryza brachyantha
OB12G10480
I
OBART02G29970
Oryza barthii
OBART02G29970
N
OBART05G12620
Oryza barthii
OBART05G12620
I
OGLUM04G05130
Oryza glumaepatula
OGLUM04G05130
I
OGLUM05G13250
Oryza glumaepatula
OGLUM05G13250
I
OGLUM12G00350
Oryza glumaepatula
OGLUM12G00350
I
OMERI01G39870
Oryza meridionalis
OMERI01G39870
I
OMERI03G24920
Oryza meridionalis
OMERI03G24920
I
OMERI05G11330
Oryza meridionalis
OMERI05G11330
I
ONIVA03G29300
Oryza nivara
ONIVA03G29300
I
ONIVA05G13090
Oryza nivara
ONIVA05G13090
I
OPUNC03G25820
Oryza punctata
OPUNC03G25820
I
OPUNC05G10670
Oryza punctata
OPUNC05G10670
I
OPUNC12G00430
Oryza punctata
OPUNC12G00430
I
orange1.1g031034m.g
Citrus sinensis
orange1.1g031034m.g
I
orange1.1g036782m.g
Citrus sinensis
orange1.1g036782m.g
I
orange1.1g038565m.g
Citrus sinensis
orange1.1g038565m.g
I
orange1.1g044340m.g
Citrus sinensis
orange1.1g044340m.g
I
ORGLA04G0085000
Oryza glaberrima
ORGLA04G0085000
N
ORGLA05G0108100
Oryza glaberrima
ORGLA05G0108100
I
ORGLA11G0005800
Oryza glaberrima
ORGLA11G0005800
I
ORGLA12G0001500
Oryza glaberrima
ORGLA12G0001500
I
ORUFI01G46340
Oryza rufipogon
ORUFI01G46340
I
ORUFI03G29410
Oryza rufipogon
ORUFI03G29410
I
ORUFI05G13610
Oryza rufipogon
ORUFI05G13610
I
ORUFI11G00360
Oryza rufipogon
ORUFI11G00360
N
OS03G0659700
Oryza sativa
OS03G0659700
I
OS05G0346800
Oryza sativa
OS05G0346800
I
OS11G0106900
Oryza sativa
OS11G0106900
I
OS12G0106200
Oryza sativa
OS12G0106200
I
Pavir.Ca01985
Panicum virgatum
Pavir.Ca01985
I
Pavir.Ia01095
Panicum virgatum
Pavir.Ia01095
I
Pavir.Ib04170
Panicum virgatum
Pavir.Ib04170
I
Pavir.J06256
Panicum virgatum
Pavir.J06256
I
Pavir.J13923
Panicum virgatum
Pavir.J13923
I
Pavir.J18260
Panicum virgatum
Pavir.J18260
I
Pavir.J21476
Panicum virgatum
Pavir.J21476
I
Pavir.J22399
Panicum virgatum
Pavir.J22399
I
PDK_20s1342451g001
Phoenix dactylifera
PDK_20s1342451g001
I
PDK_20s1728161g001
Phoenix dactylifera
PDK_20s1728161g001
I
PDK_20s1810211g001
Phoenix dactylifera
PDK_20s1810211g001
I
PGSC0003DMG400008649
Solanum tuberosum
PGSC0003DMG400008649
I
PGSC0003DMG400021204
Solanum tuberosum
PGSC0003DMG400021204
I
PGSC0003DMG400023939
Solanum tuberosum
PGSC0003DMG400023939
I
PGSC0003DMG400030456
Solanum tuberosum
PGSC0003DMG400030456
I
PK09808.1
Cannabis sativa
PK09808.1
I
PK11564.1
Cannabis sativa
PK11564.1
I
PK17019.1
Cannabis sativa
PK17019.1
I
PK21617.1
Cannabis sativa
PK21617.1
I
PK24688.1
Cannabis sativa
PK24688.1
I
Pm000193
Prunus mume
Pm000193
I
Pm011040
Prunus mume
Pm011040
I
Pm018982
Prunus mume
Pm018982
I
POPTR_0001s11610
Populus trichocarpa
POPTR_0001s11610
I
POPTR_0001s28840
Populus trichocarpa
POPTR_0001s28840
I
POPTR_0003s14880
Populus trichocarpa
POPTR_0003s14880
I
POPTR_0007s08290
Populus trichocarpa
POPTR_0007s08290
I
POPTR_0008s07280
Populus trichocarpa
POPTR_0008s07280
I
POPTR_0009s08060
Populus trichocarpa
POPTR_0009s08060
I
POPTR_0010s19180
Populus trichocarpa
POPTR_0010s19180
I
PRUPE_ppa012253mg
Prunus persica
PRUPE_ppa012253mg
I
PRUPE_ppa012275mg
Prunus persica
PRUPE_ppa012275mg
I
PRUPE_ppa012322mg
Prunus persica
PRUPE_ppa012322mg
I
PRUPE_ppa012504mg
Prunus persica
PRUPE_ppa012504mg
I
SapurV1A.0042s0120
Salix purpurea
SapurV1A.0042s0120
I
SapurV1A.0059s0540
Salix purpurea
SapurV1A.0059s0540
I
SapurV1A.0061s0670
Salix purpurea
SapurV1A.0061s0670
I
SapurV1A.0085s0450
Salix purpurea
SapurV1A.0085s0450
I
SapurV1A.0094s0480
Salix purpurea
SapurV1A.0094s0480
I
SapurV1A.0284s0080
Salix purpurea
SapurV1A.0284s0080
I
SapurV1A.0566s0080
Salix purpurea
SapurV1A.0566s0080
I
SapurV1A.0673s0190
Salix purpurea
SapurV1A.0673s0190
I
Sb01g012810
Sorghum bicolor
Sb01g012810
I
Sb05g000550
Sorghum bicolor
Sb05g000550
I
Sb08g000575
Sorghum bicolor
Sb08g000575
I
Sb09g016240
Sorghum bicolor
Sb09g016240
I
SELMODRAFT_49084
Selaginella moellendorffii
SELMODRAFT_49084
I
SELMODRAFT_49085
Selaginella moellendorffii
SELMODRAFT_49085
I
Si011647m.g
Setaria italica
Si011647m.g
I
Si024229m.g
Setaria italica
Si024229m.g
I
Si026864m.g
Setaria italica
Si026864m.g
I
Si037583m.g
Setaria italica
Si037583m.g
I
Solyc06g050950.2
Solanum lycopersicum
Solyc06g050950.2
I
Solyc06g082310.2
Solanum lycopersicum
Solyc06g082310.2
I
Solyc11g045530.1
Solanum lycopersicum
Solyc11g045530.1
I
TCM_029315
Theobroma cacao
TCM_029315
I
TCM_032557
Theobroma cacao
TCM_032557
I
TCM_042212
Theobroma cacao
TCM_042212
I
TCM_042447
Theobroma cacao
TCM_042447
I
Thhalv10008917m.g
Eutrema salsugineum
Thhalv10008917m.g
I
Thhalv10017267m.g
Eutrema salsugineum
Thhalv10017267m.g
I
Traes_1AL_DB7593004
Triticum aestivum
Traes_1AL_DB7593004
I
Traes_1BL_04EFBAECF
Triticum aestivum
Traes_1BL_04EFBAECF
I
Traes_4BS_E9E0C550B
Triticum aestivum
Traes_4BS_E9E0C550B
I
Traes_4DS_DA077BB06
Triticum aestivum
Traes_4DS_DA077BB06
I
Traes_5BL_CE4CF3B5C
Triticum aestivum
Traes_5BL_CE4CF3B5C
I
TRIUR3_11082
Triticum urartu
TRIUR3_11082
I
TRIUR3_11841
Triticum urartu
TRIUR3_11841
I
TRIUR3_27421
Triticum urartu
TRIUR3_27421
I
VIT_13s0067g01880
Vitis vinifera
VIT_13s0067g01880
I