OS03G0659700 (Oryza sativa)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 OS03G0659700 T245794_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD4
M02261_2.00 		Arabidopsis thaliana
VDNVCGSNNN
NNNSCGBNHB		 PBM
Weirauch et al.(2014)
pTH7515 		0.872 0.872
gw1.238.28.1
M02262_2.00 		Physcomitrella patens
NNNNNVNGSN
NSCNBNNNNN		 PBM
Weirauch et al.(2014)
pTH8459 		0.809 0.809
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OS03T0659700-01 LOB 1 47

Links

Other LOB family TFs
Other Oryza sativa TFs

122 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ORUFI03G29410 Oryza rufipogon ORUFI03G29410 I 1.000
ONIVA03G29300 Oryza nivara ONIVA03G29300 I 1.000
OGLUM04G05130 Oryza glumaepatula OGLUM04G05130 I 1.000
BGIOSGA013249 Oryza indica BGIOSGA013249 I 1.000
OMERI03G24920 Oryza meridionalis OMERI03G24920 I 1.000
Pavir.Ia01095 Panicum virgatum Pavir.Ia01095 I 0.979
Pavir.Ib04170 Panicum virgatum Pavir.Ib04170 I 0.979
Sb01g012810 Sorghum bicolor Sb01g012810 I 0.957
Cla009336 Citrullus lanatus Cla009336 I 0.894
GRMZM2G447176 Zea mays GRMZM2G447176 I 0.894
Traes_4AL_AD9C8CB77 Triticum aestivum Traes_4AL_AD9C8CB77 I 0.894
Carubv10010462m.g Capsella rubella Carubv10010462m.g I 0.872
Cagra.1508s0061 Capsella grandiflora Cagra.1508s0061 I 0.872
Thhalv10008917m.g Eutrema salsugineum Thhalv10008917m.g I 0.872
SapurV1A.0059s0540 Salix purpurea SapurV1A.0059s0540 I 0.872
LBD4 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002773 I 0.872
LBD4 Arabidopsis thaliana AT1G31320 D 0.872
mgf022958m Mimulus guttatus mgf022958m I 0.851
GLYMA08G17990 Glycine max GLYMA08G17990 I 0.851
PRUPE_ppa012322mg Prunus persica PRUPE_ppa012322mg I 0.851
LBD4 Vitis vinifera VIT_00s0125g00290 I 0.851
AMTR_s00032p00142260 Amborella trichopoda AMTR_s00032p00142260 I 0.851
Ciclev10006113m.g Citrus clementina Ciclev10006113m.g I 0.851
Pm010668 Prunus mume Pm010668 I 0.851
gene20083-v1.0-hybrid Fragaria vesca gene20083-v1.0-hybrid I 0.851
orange1.1g044340m.g Citrus sinensis orange1.1g044340m.g I 0.851
GLYMA15G13410 Glycine max GLYMA15G13410 I 0.851
Lus10018275.g Linum usitatissimum Lus10018275.g I 0.851
MDP0000121203 Malus domestica MDP0000121203 I 0.851
Gorai.010G170700 Gossypium raimondii Gorai.010G170700 I 0.851
orange1.1g031034m.g Citrus sinensis orange1.1g031034m.g I 0.830
MDP0000284409 Malus domestica MDP0000284409 I 0.830
Ciclev10016993m.g Citrus clementina Ciclev10016993m.g I 0.830
Solyc11g045530.1 Solanum lycopersicum Solyc11g045530.1 I 0.830
PRUPE_ppa012253mg Prunus persica PRUPE_ppa012253mg I 0.830
MDP0000268890 Malus domestica MDP0000268890 I 0.830
MDP0000265429 Malus domestica MDP0000265429 I 0.830
Aquca_118_00035 Aquilegia coerulea Aquca_118_00035 I 0.830
Lus10031769.g Linum usitatissimum Lus10031769.g I 0.830
Gorai.002G104500 Gossypium raimondii Gorai.002G104500 I 0.830
Pm011040 Prunus mume Pm011040 I 0.830
Lus10017431.g Linum usitatissimum Lus10017431.g I 0.830
LBD3 Vitis vinifera VIT_19s0027g01120 I 0.830
MTR_4g083680 Medicago truncatula MTR_4g083680 I 0.830
GLYMA07G35000 Glycine max GLYMA07G35000 I 0.830
GLYMA20G02850 Glycine max GLYMA20G02850 I 0.830
OLONG_023571 Oryza longistaminata OLONG_023571 I 0.825
gene21039-v1.0-hybrid Fragaria vesca gene21039-v1.0-hybrid I 0.809
POPTR_0010s19180 Populus trichocarpa POPTR_0010s19180 I 0.809
GRMZM2G044150 Zea mays GRMZM2G044150 I 0.809
mgf018189m Mimulus guttatus mgf018189m I 0.809
30169.m006340 Ricinus communis 30169.m006340 I 0.809
PGSC0003DMG400021204 Solanum tuberosum PGSC0003DMG400021204 I 0.809
SapurV1A.0061s0670 Salix purpurea SapurV1A.0061s0670 I 0.809
GRMZM2G025989 Zea mays GRMZM2G025989 I 0.809
POPTR_0008s07280 Populus trichocarpa POPTR_0008s07280 I 0.809
Si011647m.g Setaria italica Si011647m.g I 0.809
SapurV1A.0673s0190 Salix purpurea SapurV1A.0673s0190 I 0.809
Sb09g016240 Sorghum bicolor Sb09g016240 I 0.809
PK09808.1 Cannabis sativa PK09808.1 I 0.809
Si024229m.g Setaria italica Si024229m.g I 0.809
Ciclev10029962m.g Citrus clementina Ciclev10029962m.g I 0.809
Eucgr.B03991 Eucalyptus grandis Eucgr.B03991 I 0.809
evm.TU.supercontig_2.374 Carica papaya evm.TU.supercontig_2.374 I 0.787
PGSC0003DMG400023939 Solanum tuberosum PGSC0003DMG400023939 I 0.787
Cucsa.239660 Cucumis sativus Cucsa.239660 I 0.787
MTR_3g071590 Medicago truncatula MTR_3g071590 I 0.787
Gorai.003G149600 Gossypium raimondii Gorai.003G149600 I 0.787
Solyc02g069440.2 Solanum lycopersicum Solyc02g069440.2 I 0.787
SapurV1A.0042s0120 Salix purpurea SapurV1A.0042s0120 I 0.787
POPTR_0007s08290 Populus trichocarpa POPTR_0007s08290 I 0.787
GLYMA11G29450 Glycine max GLYMA11G29450 I 0.787
Gorai.011G290800 Gossypium raimondii Gorai.011G290800 I 0.787
MTR_5g083230 Medicago truncatula MTR_5g083230 I 0.787
ORGLA11G0005800 Oryza glaberrima ORGLA11G0005800 I 0.766
PDK_20s1810211g001 Phoenix dactylifera PDK_20s1810211g001 I 0.766
SapurV1A.0038s0110 Salix purpurea SapurV1A.0038s0110 I 0.766
SapurV1A.0023s0430 Salix purpurea SapurV1A.0023s0430 I 0.766
ORUFI11G00360 Oryza rufipogon ORUFI11G00360 N 0.766
OS12G0106200 Oryza sativa OS12G0106200 I 0.766
cassava44959.m1 Manihot esculenta cassava44959.m1 N 0.766
Thhalv10017267m.g Eutrema salsugineum Thhalv10017267m.g I 0.766
BGIOSGA034653 Oryza indica BGIOSGA034653 I 0.766
Ca_13388 Cicer arietinum Ca_13388 I 0.766
BGIOSGA036857 Oryza indica BGIOSGA036857 I 0.766
SELMODRAFT_49085 Selaginella moellendorffii SELMODRAFT_49085 I 0.766
OS11G0106900 Oryza sativa OS11G0106900 I 0.766
POPTR_0010s22470 Populus trichocarpa POPTR_0010s22470 I 0.766
POPTR_0008s04350 Populus trichocarpa POPTR_0008s04350 I 0.745
Cucsa.052720 Cucumis sativus Cucsa.052720 I 0.745
BRADI4G44850 Brachypodium distachyon BRADI4G44850 I 0.745
MDP0000822986 Malus domestica MDP0000822986 I 0.745
Bostr.7128s0261 Boechera stricta Bostr.7128s0261 I 0.745
VIT_13s0019g03700 Vitis vinifera VIT_13s0019g03700 I 0.745
PK17019.1 Cannabis sativa PK17019.1 I 0.735
LjSGA_079580.1.1 Lotus japonicus LjSGA_079580.1.1 I 0.731
POPTR_0005s10050 Populus trichocarpa POPTR_0005s10050 I 0.731
VIT_06s0004g03350 Vitis vinifera VIT_06s0004g03350 I 0.723
LBD3 Arabidopsis thaliana AT1G16530 I 0.723
Solyc06g005090.2 Solanum lycopersicum Solyc06g005090.2 I 0.723
MDP0000879799 Malus domestica MDP0000879799 N 0.723
Ca_04287 Cicer arietinum Ca_04287 I 0.723
PGSC0003DMG400025384 Solanum tuberosum PGSC0003DMG400025384 N 0.723
cassava11218.m1 Manihot esculenta cassava11218.m1 I 0.723
cassava819.valid.m1 Manihot esculenta cassava819.valid.m1 I 0.723
PRUPE_ppa011528mg Prunus persica PRUPE_ppa011528mg I 0.723
Gorai.004G012800 Gossypium raimondii Gorai.004G012800 I 0.723
Cla000556 Citrullus lanatus Cla000556 I 0.723
MTR_1g095850 Medicago truncatula MTR_1g095850 I 0.723
Lus10036130.g Linum usitatissimum Lus10036130.g I 0.723
PGSC0003DMG400025400 Solanum tuberosum PGSC0003DMG400025400 I 0.723
Lus10011645.g Linum usitatissimum Lus10011645.g I 0.723
GSMUA_Achr8G02800_001 Musa acuminata GSMUA_Achr8G02800_001 I 0.723
LOB Vitis vinifera VIT_17s0000g09010 I 0.702
ONIVA05G01850 Oryza nivara ONIVA05G01850 I 0.702
Bra018675 Brassica rapa Bra018675 N 0.702
Bo5g008590 Brassica oleracea Bo5g008590 N 0.702
Sb09g002190 Sorghum bicolor Sb09g002190 I 0.702
Solyc03g112430.1 Solanum lycopersicum Solyc03g112430.1 I 0.702
Cucsa.166030 Cucumis sativus Cucsa.166030 N 0.702
Pm018585 Prunus mume Pm018585 I 0.702
Gorai.012G094200 Gossypium raimondii Gorai.012G094200 N 0.702