ONIVA05G01850 (Oryza nivara)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 ONIVA05G01850 T245662_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD4
M02261_2.00 		Arabidopsis thaliana
VDNVCGSNNN
NNNSCGBNHB		 PBM
Weirauch et al.(2014)
pTH7515 		0.701 0.701
gw1.238.28.1
M02262_2.00 		Physcomitrella patens
NNNNNVNGSN
NSCNBNNNNN		 PBM
Weirauch et al.(2014)
pTH8459 		0.701 0.701
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA05G01850.1 LOB 38 124

Links

Other LOB family TFs
Other Oryza nivara TFs

125 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ORUFI05G01750 Oryza rufipogon ORUFI05G01750 I 0.912
BGIOSGA018905 Oryza indica BGIOSGA018905 I 0.912
OS05G0123000 Oryza sativa OS05G0123000 I 0.912
LjSGA_079940.1 Lotus japonicus LjSGA_079940.1 N 0.889
OPUNC05G01600 Oryza punctata OPUNC05G01600 N 0.881
OB05G11740 Oryza brachyantha OB05G11740 I 0.879
evm.TU.contig_40341.1 Carica papaya evm.TU.contig_40341.1 I 0.872
ORGLA05G0016500 Oryza glaberrima ORGLA05G0016500 N 0.869
OMERI05G01730 Oryza meridionalis OMERI05G01730 N 0.867
OGLUM05G01700 Oryza glumaepatula OGLUM05G01700 N 0.862
PDK_20s1376911g004 Phoenix dactylifera PDK_20s1376911g004 I 0.852
Pavir.Ca00718 Panicum virgatum Pavir.Ca00718 I 0.848
Pavir.J04684 Panicum virgatum Pavir.J04684 I 0.848
PGSC0003DMG400027372 Solanum tuberosum PGSC0003DMG400027372 I 0.846
PGSC0003DMG400025400 Solanum tuberosum PGSC0003DMG400025400 I 0.846
Sb09g002190 Sorghum bicolor Sb09g002190 I 0.838
GRMZM2G165805 Zea mays GRMZM2G165805 N 0.828
Si024430m.g Setaria italica Si024430m.g N 0.828
LPERR05G01520 Leersia perrieri LPERR05G01520 N 0.828
PK17019.1 Cannabis sativa PK17019.1 I 0.824
PDK_20s1595351g001 Phoenix dactylifera PDK_20s1595351g001 N 0.808
AC214648.3_FG005 Zea mays AC214648.3_FG005 I 0.798
GSMUA_Achr7G15500_001 Musa acuminata GSMUA_Achr7G15500_001 I 0.788
cassava40961.m1 Manihot esculenta cassava40961.m1 I 0.788
SapurV1A.0038s0110 Salix purpurea SapurV1A.0038s0110 I 0.788
Solyc04g050010.1 Solanum lycopersicum Solyc04g050010.1 N 0.782
SapurV1A.0023s0430 Salix purpurea SapurV1A.0023s0430 I 0.778
30111.m000703 Ricinus communis 30111.m000703 I 0.778
Traes_1AS_26CB95294 Triticum aestivum Traes_1AS_26CB95294 N 0.778
POPTR_0010s22470 Populus trichocarpa POPTR_0010s22470 I 0.778
TCM_041094 Theobroma cacao TCM_041094 I 0.778
Traes_1DS_A31FB6CB2 Triticum aestivum Traes_1DS_A31FB6CB2 N 0.778
Traes_1BS_CE38938A8 Triticum aestivum Traes_1BS_CE38938A8 N 0.778
MLOC_68570 Hordeum vulgare MLOC_68570 N 0.778
OLONG_017777 Oryza longistaminata OLONG_017777 N 0.769
orange1.1g047491m.g Citrus sinensis orange1.1g047491m.g I 0.768
mgf015666m Mimulus guttatus mgf015666m N 0.768
Eucgr.J01123 Eucalyptus grandis Eucgr.J01123 I 0.768
GSMUA_Achr10G22970_001 Musa acuminata GSMUA_Achr10G22970_001 I 0.768
TCM_043081 Theobroma cacao TCM_043081 I 0.768
POPTR_0008s04350 Populus trichocarpa POPTR_0008s04350 I 0.768
Ciclev10029283m.g Citrus clementina Ciclev10029283m.g I 0.768
Gorai.004G012800 Gossypium raimondii Gorai.004G012800 I 0.768
CM1887.100.nc Lotus japonicus CM1887.100.nc I 0.768
PK23777.1 Cannabis sativa PK23777.1 I 0.768
BRADI2G37960 Brachypodium distachyon BRADI2G37960 N 0.768
Gorai.010G203800 Gossypium raimondii Gorai.010G203800 I 0.768
PK27389.1 Cannabis sativa PK27389.1 I 0.768
GLYMA20G31780 Glycine max GLYMA20G31780 I 0.768
orange1.1g026556m.g Citrus sinensis orange1.1g026556m.g I 0.758
Pm000938 Prunus mume Pm000938 I 0.758
VIT_13s0019g03700 Vitis vinifera VIT_13s0019g03700 I 0.758
MDP0000151784 Malus domestica MDP0000151784 I 0.758
MDP0000319331 Malus domestica MDP0000319331 I 0.758
Ca_14605 Cicer arietinum Ca_14605 I 0.758
Ca_04287 Cicer arietinum Ca_04287 I 0.758
cassava819.valid.m1 Manihot esculenta cassava819.valid.m1 I 0.758
MTR_1g095850 Medicago truncatula MTR_1g095850 I 0.758
Ciclev10033956m.g Citrus clementina Ciclev10033956m.g I 0.758
PRUPE_ppa011528mg Prunus persica PRUPE_ppa011528mg I 0.758
MDP0000123013 Malus domestica MDP0000123013 I 0.758
Gorai.001G129700 Gossypium raimondii Gorai.001G129700 I 0.758
Gorai.006G120900 Gossypium raimondii Gorai.006G120900 I 0.758
GLYMA15G05030 Glycine max GLYMA15G05030 I 0.758
Lus10040373.g Linum usitatissimum Lus10040373.g I 0.758
GLYMA13G40370 Glycine max GLYMA13G40370 I 0.758
GLYMA10G35760 Glycine max GLYMA10G35760 I 0.758
cassava11218.m1 Manihot esculenta cassava11218.m1 I 0.758
POPTR_0005s10050 Populus trichocarpa POPTR_0005s10050 I 0.750
Gorai.012G094200 Gossypium raimondii Gorai.012G094200 N 0.747
evm.TU.supercontig_53.26 Carica papaya evm.TU.supercontig_53.26 N 0.747
Eucgr.B02465 Eucalyptus grandis Eucgr.B02465 I 0.747
MDP0000218986 Malus domestica MDP0000218986 I 0.747
MDP0000318244 Malus domestica MDP0000318244 I 0.747
VIT_06s0004g03350 Vitis vinifera VIT_06s0004g03350 I 0.747
Solyc11g072470.1 Solanum lycopersicum Solyc11g072470.1 I 0.747
Solyc06g005090.2 Solanum lycopersicum Solyc06g005090.2 I 0.747
GLYMA12G07650 Glycine max GLYMA12G07650 I 0.747
MTR_2g093310 Medicago truncatula MTR_2g093310 I 0.747
GSMUA_Achr8G09700_001 Musa acuminata GSMUA_Achr8G09700_001 N 0.747
VIT_06s0004g03330 Vitis vinifera VIT_06s0004g03330 I 0.747
Cla000556 Citrullus lanatus Cla000556 I 0.747
Cla020379 Citrullus lanatus Cla020379 I 0.747
gene25294-v1.0-hybrid Fragaria vesca gene25294-v1.0-hybrid I 0.737
AMTR_s00080p00153120 Amborella trichopoda AMTR_s00080p00153120 N 0.737
Gorai.013G002900 Gossypium raimondii Gorai.013G002900 I 0.737
GLYMA11G15810 Glycine max GLYMA11G15810 N 0.737
chr3.CM0246.260.nc Lotus japonicus chr3.CM0246.260.nc N 0.737
Pavir.Ib01336 Panicum virgatum Pavir.Ib01336 N 0.737
Pavir.Ia03612 Panicum virgatum Pavir.Ia03612 N 0.737
PRUPE_ppa023989mg Prunus persica PRUPE_ppa023989mg I 0.737
cassava44959.m1 Manihot esculenta cassava44959.m1 N 0.737
GSMUA_Achr6G33070_001 Musa acuminata GSMUA_Achr6G33070_001 I 0.737
GRMZM2G021095 Zea mays GRMZM2G021095 N 0.737
Sb01g038650 Sorghum bicolor Sb01g038650 N 0.737
Cucsa.166030 Cucumis sativus Cucsa.166030 N 0.737
Lus10036130.g Linum usitatissimum Lus10036130.g I 0.727
BGIOSGA038947 Oryza indica BGIOSGA038947 N 0.727
BGIOSGA010952 Oryza indica BGIOSGA010952 N 0.727
Cucsa.052720 Cucumis sativus Cucsa.052720 I 0.727
OGLUM03G13350 Oryza glumaepatula OGLUM03G13350 N 0.727
PGSC0003DMG400007503 Solanum tuberosum PGSC0003DMG400007503 I 0.727
OBART03G13260 Oryza barthii OBART03G13260 N 0.727
Lus10011645.g Linum usitatissimum Lus10011645.g I 0.727
OS03G0287400 Oryza sativa OS03G0287400 N 0.727
ORUFI03G13900 Oryza rufipogon ORUFI03G13900 N 0.727
OPUNC03G12790 Oryza punctata OPUNC03G12790 N 0.727
OMERI03G12370 Oryza meridionalis OMERI03G12370 N 0.727
ORGLA03G0128100 Oryza glaberrima ORGLA03G0128100 N 0.727
Solyc05g048740.2 Solanum lycopersicum Solyc05g048740.2 I 0.727
MTR_4g060950 Medicago truncatula MTR_4g060950 I 0.727
ONIVA03G14510 Oryza nivara ONIVA03G14510 N 0.727
Pm018585 Prunus mume Pm018585 I 0.727
Aquca_027_00112 Aquilegia coerulea Aquca_027_00112 N 0.727
GRMZM2G145568 Zea mays GRMZM2G145568 N 0.727
gene23226-v1.0-hybrid Fragaria vesca gene23226-v1.0-hybrid N 0.717
Si037280m.g Setaria italica Si037280m.g N 0.717
OB03G23270 Oryza brachyantha OB03G23270 N 0.717
OLONG_014851 Oryza longistaminata OLONG_014851 N 0.714
LjSGA_079580.1.1 Lotus japonicus LjSGA_079580.1.1 I 0.712
Ciclev10032782m.g Citrus clementina Ciclev10032782m.g N 0.707
Carubv10010390m.g Capsella rubella Carubv10010390m.g N 0.707
MDP0000822986 Malus domestica MDP0000822986 I 0.707
MDP0000879799 Malus domestica MDP0000879799 N 0.707
OS03G0659700 Oryza sativa OS03G0659700 I 0.702