ORGLA05G0222200 (Oryza glaberrima)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ORGLA05G0222200 T221847_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RLT1
M02038_2.00 		Arabidopsis thaliana
NDHTCWWN
NWWGADHN		 PBM
Weirauch et al.(2014)
pTH5432 		0.688 0.719
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA05G0222200.1 Homeodomain 57 113

Links

Other Homeodomain family TFs
Other Oryza glaberrima TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA007535 Oryza indica BGIOSGA007535 N 0.000
BRADI3G03747 Brachypodium distachyon BRADI3G03747 N 0.000
GRMZM2G033138 Zea mays GRMZM2G033138 N 0.000
GSMUA_Achr8G23890_001 Musa acuminata GSMUA_Achr8G23890_001 N 0.000
LPERR02G03280 Leersia perrieri LPERR02G03280 N 0.000
OB02G13160 Oryza brachyantha OB02G13160 N 0.000
ORUFI02G03770 Oryza rufipogon ORUFI02G03770 N 0.000
OS02G0147800 Oryza sativa OS02G0147800 N 0.000
Pavir.Ab00383 Panicum virgatum Pavir.Ab00383 N 0.000
Pavir.J02165 Panicum virgatum Pavir.J02165 N 0.000
Sb04g003450 Sorghum bicolor Sb04g003450 N 0.000
Si019956m.g Setaria italica Si019956m.g N 0.000
Traes_6AS_9762AE81D Triticum aestivum Traes_6AS_9762AE81D N 0.000