POPTR_0006s24680 (Populus trichocarpa)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 POPTR_0006s24680 T222518_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATH1
M10627_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATH1_01
0.855 0.898
Q5EVH4_OIKDI
M02227_2.00
Oikopleura dioica
NTGACAKN

NMTGTCAN
PBM
Weirauch et al.(2014)
pTH6041
0.604 0.510
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0006s24680.1 Homeodomain 472 523

Links

Other Homeodomain family TFs
Other Populus trichocarpa TFs

953 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ASIS002444 Anopheles sinensis ASIS002444 N 0.000
CLEC004367 Cimex lectularius CLEC004367 N 0.000
Cmyd_10007727 Chelonia mydas Cmyd_10007727 N 0.000
CRE28162 Caenorhabditis remanei CRE28162 N 0.000
GH16346 Drosophila grimshawi FBgn0123817 N 0.000
LCUP017801 Lucilia cuprina LCUP017801 N 0.000