POPTR_0011s05660 (Populus trichocarpa)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 POPTR_0011s05660 T222552_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RLT1
M02038_2.00 		Arabidopsis thaliana
NDHTCWWN
NWWGADHN		 PBM
Weirauch et al.(2014)
pTH5432 		0.844 0.789
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0011s05660.1 Homeodomain 9 65

Links

Other Homeodomain family TFs
Other Populus trichocarpa TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL002435 Aedes aegypti AAEL002435 N
AALB006606 Anopheles albimanus AALB006606 N
AALB007953 Anopheles albimanus AALB007953 N
AATE005106 Anopheles atroparvus AATE005106 N
AATE019620 Anopheles atroparvus AATE019620 N
ACOM035386 Anopheles coluzzii ACOM035386 N
AEPI011038 Anopheles epiroticus AEPI011038 N
AFAF010793 Anopheles farauti AFAF010793 N
AFUN000096 Anopheles funestus AFUN000096 N
AFUN010359 Anopheles funestus AFUN010359 N
AGAP010063 Anopheles gambiae AGAP010063 N
AGAP012669 Anopheles gambiae AGAP012669 N
AMEC021814 Anopheles melas AMEC021814 N
AMEM018281 Anopheles merus AMEM018281 N
AMIN006656 Anopheles minimus AMIN006656 N
ASIS017738 Anopheles sinensis ASIS017738 N