TCM_026767 (Theobroma cacao)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 TCM_026767 T223920_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KNAT6
M02037_2.00 		Arabidopsis thaliana
NNWGACNNNN
NNNNGTCWNN		 PBM
Weirauch et al.(2014)
pTH7296 		0.811 0.754
KNOX3_HORVU
M10790_2.00 		Hordeum vulgare Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$KNOX3_01 		0.794 0.737
GRMZM2G087741
M02138_2.00 		Zea mays
NNTGACRKCN
NGMYGTCANN		 PBM
Weirauch et al.(2014)
pTH5816 		0.767 0.807
GRMZM2G135447
M02139_2.00 		Zea mays
DTGACRKS
SMYGTCAH		 PBM
Weirauch et al.(2014)
pTH6328 		0.762 0.737
PK25034.1
M01254_2.00 		Cannabis sativa
NNTGACRKBN
NVMYGTCANN		 PBM
Lambert et al.(2019)
pTH11259 		0.690 0.737
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY11655 Homeodomain 281 340
EOY11656 Homeodomain 227 286

Links

Other Homeodomain family TFs
Other Theobroma cacao TFs

311 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F443_18706 Phytophthora parasitica F443_18706 N
fgenesh_scip_prom.28083.10560 Phytophthora lateralis fgenesh_scip_prom.28083.10560 N
fgenesh_scip_prom.28083.4436 Phytophthora lateralis fgenesh_scip_prom.28083.4436 N
fgenesh_scip_prom.46568.1302 Phytophthora kernoviae fgenesh_scip_prom.46568.1302 N
maker-pag1_scaffold_323-fgenesh-gene-0.7 Pythium aphanidermatum maker-pag1_scaffold_323-fgenesh-gene-0.7 N
maker-pve_contig_254-fgenesh-gene-0.2 Pythium vexans maker-pve_contig_254-fgenesh-gene-0.2 N
Phyra80976 Phytophthora ramorum Phyra80976 N
Physo134019 Phytophthora sojae Physo134019 N
PITG_14515 Phytophthora infestans PITG_14515 N
PITG_20637 Phytophthora infestans PITG_20637 N
PYU1_G013877 Pythium ultimum PYU1_G013877 N