CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ca_11272
(
Cicer arietinum
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Ca_11272
T225444_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RLT1
M02038_2.00
Arabidopsis thaliana
NDHTCWWN
NWWGADHN
PBM
Weirauch et al.(2014)
pTH5432
0.678
0.719
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ca_11272
Homeodomain
19
75
KVKRKMKTASQLEILEKAYAAEPYPSEEFRVELCVKLGLSDRQLQMWFCHRRLKDRK
Links
Other
Homeodomain
family TFs
Other
Cicer arietinum
TFs
131 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CJA17841
Caenorhabditis japonica
CJA17841
N
0.000
CJA30945
Caenorhabditis japonica
CJA30945
N
0.000
CJA33359
Caenorhabditis japonica
CJA33359
N
0.000