CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.032420
(
Cucumis sativus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Cucsa.032420
T227161_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.032420.1
Homeodomain
11
76
AFRFTASEVAEMEAILQGHNNTMPAREVLVALADKFSESVERKGKIAVQMKQVWNWFQNRRYAIRA
Cucsa.032420.2
Homeodomain
8
55
HNNTMPAREVLVALADKFSESVERKGKIAVQMKQVWNWFQNRRYAIRA
Cucsa.032420.3
Homeodomain
8
55
HNNTMPAREVLVALADKFSESVERKGKIAVQMKQVWNWFQNRRYAIRA
Cucsa.032420.4
Homeodomain
8
55
HNNTMPAREVLVALADKFSESVERKGKIAVQMKQVWNWFQNRRYAIRA
Links
Other
Homeodomain
family TFs
Other
Cucumis sativus
TFs
113 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GPLIN_001210600
Globodera pallida
GPLIN_001210600
N
0.000
L596_g14232
Steinernema carpocapsae
L596_g14232
I
0.000
L889_g7378
Steinernema feltiae
L889_g7378
I
0.000
L898_g2678
Steinernema monticolum
L898_g2678
I
0.000
PTRK_0000181700
Parastrongyloides trichosuri
PTRK_0000181700
I
0.000
SPAL_0000498200
Strongyloides papillosus
SPAL_0000498200
I
0.000