Cucsa.032420 (Cucumis sativus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Cucsa.032420 T227161_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.032420.1 Homeodomain 11 76
Cucsa.032420.2 Homeodomain 8 55
Cucsa.032420.3 Homeodomain 8 55
Cucsa.032420.4 Homeodomain 8 55

Links

Other Homeodomain family TFs
Other Cucumis sativus TFs

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0174s00240 Populus trichocarpa POPTR_0174s00240 N 0.863
PRUPE_ppa007389mg Prunus persica PRUPE_ppa007389mg N 0.857
orange1.1g016887m.g Citrus sinensis orange1.1g016887m.g N 0.855
Ciclev10008640m.g Citrus clementina Ciclev10008640m.g N 0.850
Lus10013684.g Linum usitatissimum Lus10013684.g N 0.847
Lus10017944.g Linum usitatissimum Lus10017944.g N 0.847
GLYMA12G18490 Glycine max GLYMA12G18490 N 0.843
chr3.CM0282.620.nc Lotus japonicus chr3.CM0282.620.nc N 0.841
GLYMA06G35561 Glycine max GLYMA06G35561 N 0.840
MTR_8g061040 Medicago truncatula MTR_8g061040 N 0.839
Gorai.013G172000 Gossypium raimondii Gorai.013G172000 N 0.831
TCM_046875 Theobroma cacao TCM_046875 N 0.831
VIT_19s0014g01880 Vitis vinifera VIT_19s0014g01880 N 0.830
Gorai.002G065900 Gossypium raimondii Gorai.002G065900 N 0.825
Bra022316 Brassica rapa Bra022316 N 0.815
Aquca_052_00043 Aquilegia coerulea Aquca_052_00043 N 0.808
evm.TU.supercontig_80.16 Carica papaya evm.TU.supercontig_80.16 N 0.808
Eucgr.F01181 Eucalyptus grandis Eucgr.F01181 N 0.794
SapurV1A.0083s0320 Salix purpurea SapurV1A.0083s0320 N 0.793
Pm011344 Prunus mume Pm011344 N 0.791
AMTR_s00011p00262800 Amborella trichopoda AMTR_s00011p00262800 N 0.780
Solyc10g007130.2 Solanum lycopersicum Solyc10g007130.2 N 0.772
gene27205-v1.0-hybrid Fragaria vesca gene27205-v1.0-hybrid N 0.771
SapurV1A.0303s0100 Salix purpurea SapurV1A.0303s0100 N 0.770
POPTR_0011s09970 Populus trichocarpa POPTR_0011s09970 N 0.770
PK03811.1 Cannabis sativa PK03811.1 N 0.767
MDP0000268133 Malus domestica MDP0000268133 N 0.766
MDP0000315095 Malus domestica MDP0000315095 N 0.766
AT3G18380 Arabidopsis thaliana AT3G18380 N 0.764
fgenesh2_kg.3__2039__AT3G18380.2 Arabidopsis lyrata fgenesh2_kg.3__2039__AT3G18380.2 N 0.764
Carubv10014092m.g Capsella rubella Carubv10014092m.g N 0.752
Bostr.19424s0824 Boechera stricta Bostr.19424s0824 N 0.752
Cagra.1681s0007 Capsella grandiflora Cagra.1681s0007 N 0.752
TRIUR3_19251 Triticum urartu TRIUR3_19251 N 0.743
Traes_7DS_197A95728 Triticum aestivum Traes_7DS_197A95728 N 0.743
MLOC_61712 Hordeum vulgare MLOC_61712 N 0.743
chr3.CM0282.640.nc Lotus japonicus chr3.CM0282.640.nc N 0.742
Bo5g118650 Brassica oleracea Bo5g118650 N 0.735
Bra037587 Brassica rapa Bra037587 N 0.728
Bo1g117640 Brassica oleracea Bo1g117640 N 0.728
OLONG_009306 Oryza longistaminata OLONG_009306 N 0.724
OBART06G15310 Oryza barthii OBART06G15310 N 0.724
OMERI06G16500 Oryza meridionalis OMERI06G16500 N 0.724
OPUNC06G13990 Oryza punctata OPUNC06G13990 N 0.724
OS06G0485100 Oryza sativa OS06G0485100 N 0.724
BGIOSGA021223 Oryza indica BGIOSGA021223 N 0.724
ORUFI06G16210 Oryza rufipogon ORUFI06G16210 N 0.724
LPERR06G11990 Leersia perrieri LPERR06G11990 N 0.722
BRADI1G42040 Brachypodium distachyon BRADI1G42040 N 0.721
GSMUA_Achr4G18450_001 Musa acuminata GSMUA_Achr4G18450_001 N 0.715
mgf014854m Mimulus guttatus mgf014854m N 0.715
30209.m001510 Ricinus communis 30209.m001510 N 0.712
GRMZM2G111204 Zea mays GRMZM2G111204 N 0.654
OGLUM06G16330 Oryza glumaepatula OGLUM06G16330 N 0.653
Pavir.Ba02980 Panicum virgatum Pavir.Ba02980 N 0.649
Pavir.Bb01334 Panicum virgatum Pavir.Bb01334 N 0.649
Sb02g020940 Sorghum bicolor Sb02g020940 N 0.649
GRMZM2G126170 Zea mays GRMZM2G126170 N 0.648
Si030167m.g Setaria italica Si030167m.g N 0.647
TTAC_0000456101 Hydatigera taeniaeformis TTAC_0000456101 N 0.639
A_08314 Schistosoma haematobium A_08314 N 0.630
TASK_0000266001 Taenia asiatica TASK_0000266001 N 0.629
Minc14799 Meloidogyne incognita Minc14799 N 0.626
WUBG_18725 Wuchereria bancrofti WUBG_18725 N 0.626
TsM_001096000 Taenia solium TsM_001096000 N 0.625
SMRZ_0000101601 Schistosoma margrebowiei SMRZ_0000101601 N 0.620
SCUD_0001900601 Schistosoma curassoni SCUD_0001900601 N 0.620
ECPE_0000616401 Echinostoma caproni ECPE_0000616401 N 0.620
SMTD_0000662501 Schistosoma mattheei SMTD_0000662501 N 0.620
PXEA_0003344501 Protopolystoma xenopodis PXEA_0003344501 N 0.620
snap_masked-nMf.1.1.scaf05842-processed-gene-0.7 Meloidogyne floridensis snap_masked-nMf.1.1.scaf05842-processed-gene-0.7 N 0.620
TRE_0000664901 Trichobilharzia regenti TRE_0000664901 N 0.620
TRE_0000350801 Trichobilharzia regenti TRE_0000350801 N 0.620
SPER_0002932401 Spirometra erinaceieuropaei SPER_0002932401 N 0.620
HHAL005220-PA Halyomorpha halys HHAL005220-PA N 0.620
DME_0000947201 Dracunculus medinensis DME_0000947201 N 0.620
SMU15030938 Schmidtea mediterranea SMU15030938 N 0.620
GM19280 Drosophila sechellia FBgn0174180 N 0.619
SPER_0001728701 Spirometra erinaceieuropaei SPER_0001728701 N 0.617
ANCDUO_16102 Ancylostoma duodenale ANCDUO_16102 N 0.616
ENSGALG00000020423 Gallus gallus ENSGALG00000020423 N 0.616
ANCCAN_19464 Ancylostoma caninum ANCCAN_19464 N 0.616
NECAME_04746 Necator americanus NECAME_04746 N 0.616
A_05161 Schistosoma haematobium A_05161 N 0.613
EVEC_0001374701 Enterobius vermicularis EVEC_0001374701 N 0.611
SMTD_0001595501 Schistosoma mattheei SMTD_0001595501 N 0.609
YQE_02583 Dendroctonus ponderosae YQE_02583 N 0.609
AARA009718 Anopheles arabiensis AARA009718 N 0.609
ADIR002916 Anopheles dirus ADIR002916 N 0.609
AEPI008543 Anopheles epiroticus AEPI008543 N 0.609
ANCCAN_04049 Ancylostoma caninum ANCCAN_04049 I 0.609
Ocbimv22022773m.g Octopus bimaculoides Ocbimv22022773m.g I 0.609
SNAPOd2T00027099001 Oikopleura dioica SNAPOd2T00027099001 N 0.609
CpipJ_CPIJ015117 Culex pipiens CpipJ_CPIJ015117 N 0.609
ACAC_0000669701 Angiostrongylus cantonensis ACAC_0000669701 N 0.609
SCUD_0000482001 Schistosoma curassoni SCUD_0000482001 I 0.609
TsM_000403100 Taenia solium TsM_000403100 N 0.609
AFAF003697 Anopheles farauti AFAF003697 N 0.609
AFUN006006 Anopheles funestus AFUN006006 N 0.609
AMIN003814 Anopheles minimus AMIN003814 N 0.609
ANCDUO_22747 Ancylostoma duodenale ANCDUO_22747 N 0.609
ANCCEY_01003 Ancylostoma ceylanicum ANCCEY_01003 I 0.609
Hba_19301 Heterorhabditis bacteriophora Hba_19301 N 0.609
CPIJ015117 Culex quinquefasciatus CPIJ015117 N 0.609
PXEA_0001530801 Protopolystoma xenopodis PXEA_0001530801 N 0.609
PXEA_0000997401 Protopolystoma xenopodis PXEA_0000997401 N 0.609
ASTEI04299 Anopheles stephensi ASTEI04299 N 0.609
L596_g19867 Steinernema carpocapsae L596_g19867 N 0.608
Hba_10254 Heterorhabditis bacteriophora Hba_10254 N 0.606
ANCCAN_14745 Ancylostoma caninum ANCCAN_14745 N 0.603
DICVIV_01479 Dictyocaulus viviparus DICVIV_01479 N 0.603
scaffold958-EXSNAP2012.2 Pristionchus exspectatus scaffold958-EXSNAP2012.2 N 0.602