POPTR_0011s09970 (Populus trichocarpa)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 POPTR_0011s09970 T222554_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0011s09970.1 Homeodomain 12 76

Links

Other Homeodomain family TFs
Other Populus trichocarpa TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0083s0320 Salix purpurea SapurV1A.0083s0320 N 0.867
PK03811.1 Cannabis sativa PK03811.1 N 0.854
Gorai.002G065900 Gossypium raimondii Gorai.002G065900 N 0.838
Bo1g117640 Brassica oleracea Bo1g117640 N 0.814
Bra037587 Brassica rapa Bra037587 N 0.814
GSMUA_Achr4G18450_001 Musa acuminata GSMUA_Achr4G18450_001 N 0.808
30209.m001510 Ricinus communis 30209.m001510 N 0.795
mgf014854m Mimulus guttatus mgf014854m N 0.795
SapurV1A.0303s0100 Salix purpurea SapurV1A.0303s0100 N 0.782
gene27205-v1.0-hybrid Fragaria vesca gene27205-v1.0-hybrid N 0.775
PRUPE_ppa007389mg Prunus persica PRUPE_ppa007389mg N 0.774
Ciclev10008640m.g Citrus clementina Ciclev10008640m.g N 0.771
MDP0000268133 Malus domestica MDP0000268133 N 0.771
MDP0000315095 Malus domestica MDP0000315095 N 0.771
orange1.1g016887m.g Citrus sinensis orange1.1g016887m.g N 0.771
Solyc10g007130.2 Solanum lycopersicum Solyc10g007130.2 N 0.770
Cucsa.032420 Cucumis sativus Cucsa.032420 N 0.770
Lus10013684.g Linum usitatissimum Lus10013684.g N 0.765
MTR_8g061040 Medicago truncatula MTR_8g061040 N 0.764
GLYMA06G35561 Glycine max GLYMA06G35561 N 0.763
GLYMA12G18490 Glycine max GLYMA12G18490 N 0.763
chr3.CM0282.620.nc Lotus japonicus chr3.CM0282.620.nc N 0.763
Lus10017944.g Linum usitatissimum Lus10017944.g N 0.761
Gorai.013G172000 Gossypium raimondii Gorai.013G172000 N 0.753
TCM_046875 Theobroma cacao TCM_046875 N 0.749
VIT_19s0014g01880 Vitis vinifera VIT_19s0014g01880 N 0.748
GRMZM2G126170 Zea mays GRMZM2G126170 N 0.730
Sb02g020940 Sorghum bicolor Sb02g020940 N 0.730
Si030167m.g Setaria italica Si030167m.g N 0.730
Pavir.Ba02980 Panicum virgatum Pavir.Ba02980 N 0.730
Pavir.Bb01334 Panicum virgatum Pavir.Bb01334 N 0.730
Aquca_052_00043 Aquilegia coerulea Aquca_052_00043 N 0.722
Eucgr.F01181 Eucalyptus grandis Eucgr.F01181 N 0.705
AMTR_s00011p00262800 Amborella trichopoda AMTR_s00011p00262800 N 0.696
Pm011344 Prunus mume Pm011344 N 0.692
OLONG_009303 Oryza longistaminata OLONG_009303 N 0.684
OPUNC06G13910 Oryza punctata OPUNC06G13910 N 0.684
Bo5g118650 Brassica oleracea Bo5g118650 N 0.674
chr3.CM0282.640.nc Lotus japonicus chr3.CM0282.640.nc N 0.664
Bostr.19424s0824 Boechera stricta Bostr.19424s0824 N 0.663
Cagra.1681s0007 Capsella grandiflora Cagra.1681s0007 N 0.663
Carubv10014092m.g Capsella rubella Carubv10014092m.g N 0.663
MLOC_61712 Hordeum vulgare MLOC_61712 N 0.657
Traes_7DS_197A95728 Triticum aestivum Traes_7DS_197A95728 N 0.657
TRIUR3_19251 Triticum urartu TRIUR3_19251 N 0.657
AT3G18380 Arabidopsis thaliana AT3G18380 N 0.651
fgenesh2_kg.3__2039__AT3G18380.2 Arabidopsis lyrata fgenesh2_kg.3__2039__AT3G18380.2 N 0.651
BGIOSGA021223 Oryza indica BGIOSGA021223 N 0.640
LPERR06G11990 Leersia perrieri LPERR06G11990 N 0.640
OBART06G15310 Oryza barthii OBART06G15310 N 0.640
OLONG_009306 Oryza longistaminata OLONG_009306 N 0.640
OMERI06G16500 Oryza meridionalis OMERI06G16500 N 0.640
OPUNC06G13990 Oryza punctata OPUNC06G13990 N 0.640
ORUFI06G16210 Oryza rufipogon ORUFI06G16210 N 0.640
OS06G0485100 Oryza sativa OS06G0485100 N 0.640
POPTR_0174s00240 Populus trichocarpa POPTR_0174s00240 N 0.640
BRADI1G42040 Brachypodium distachyon BRADI1G42040 N 0.635
TRIUR3_24308 Triticum urartu TRIUR3_24308 N 0.634