Gorai.013G172000 (Gossypium raimondii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Gorai.013G172000 T228815_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.013G172000.1 Homeodomain 11 76
Gorai.013G172000.2 Homeodomain 11 76
Gorai.013G172000.3 Homeodomain 13 73
Gorai.013G172000.4 Homeodomain 13 73

Links

Other Homeodomain family TFs
Other Gossypium raimondii TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_046875 Theobroma cacao TCM_046875 N 0.863
VIT_19s0014g01880 Vitis vinifera VIT_19s0014g01880 N 0.836
PRUPE_ppa007389mg Prunus persica PRUPE_ppa007389mg N 0.834
Ciclev10008640m.g Citrus clementina Ciclev10008640m.g N 0.834
orange1.1g016887m.g Citrus sinensis orange1.1g016887m.g N 0.834
Cucsa.032420 Cucumis sativus Cucsa.032420 N 0.831
Lus10013684.g Linum usitatissimum Lus10013684.g N 0.830
GLYMA12G18490 Glycine max GLYMA12G18490 N 0.829
chr3.CM0282.620.nc Lotus japonicus chr3.CM0282.620.nc N 0.829
GLYMA06G35561 Glycine max GLYMA06G35561 N 0.828
MTR_8g061040 Medicago truncatula MTR_8g061040 N 0.827
Lus10017944.g Linum usitatissimum Lus10017944.g N 0.826
Aquca_052_00043 Aquilegia coerulea Aquca_052_00043 N 0.808
Bo5g118650 Brassica oleracea Bo5g118650 N 0.782
AMTR_s00011p00262800 Amborella trichopoda AMTR_s00011p00262800 N 0.781
Gorai.002G065900 Gossypium raimondii Gorai.002G065900 N 0.780
Bostr.19424s0824 Boechera stricta Bostr.19424s0824 N 0.769
Cagra.1681s0007 Capsella grandiflora Cagra.1681s0007 N 0.769
Carubv10014092m.g Capsella rubella Carubv10014092m.g N 0.769
Eucgr.F01181 Eucalyptus grandis Eucgr.F01181 N 0.763
POPTR_0174s00240 Populus trichocarpa POPTR_0174s00240 N 0.760
Bra022316 Brassica rapa Bra022316 N 0.758
AT3G18380 Arabidopsis thaliana AT3G18380 N 0.757
fgenesh2_kg.3__2039__AT3G18380.2 Arabidopsis lyrata fgenesh2_kg.3__2039__AT3G18380.2 N 0.757
POPTR_0011s09970 Populus trichocarpa POPTR_0011s09970 N 0.753
SapurV1A.0083s0320 Salix purpurea SapurV1A.0083s0320 N 0.753
SapurV1A.0303s0100 Salix purpurea SapurV1A.0303s0100 N 0.753
Pm011344 Prunus mume Pm011344 N 0.751
evm.TU.supercontig_80.16 Carica papaya evm.TU.supercontig_80.16 N 0.751
PK03811.1 Cannabis sativa PK03811.1 N 0.751
Bo1g117640 Brassica oleracea Bo1g117640 N 0.750
Bra037587 Brassica rapa Bra037587 N 0.750
gene27205-v1.0-hybrid Fragaria vesca gene27205-v1.0-hybrid N 0.749
Solyc10g007130.2 Solanum lycopersicum Solyc10g007130.2 N 0.748
MDP0000268133 Malus domestica MDP0000268133 N 0.744
MDP0000315095 Malus domestica MDP0000315095 N 0.744
MLOC_61712 Hordeum vulgare MLOC_61712 N 0.743
Traes_7DS_197A95728 Triticum aestivum Traes_7DS_197A95728 N 0.743
TRIUR3_19251 Triticum urartu TRIUR3_19251 N 0.743
chr3.CM0282.640.nc Lotus japonicus chr3.CM0282.640.nc N 0.730
BGIOSGA021223 Oryza indica BGIOSGA021223 N 0.726
LPERR06G11990 Leersia perrieri LPERR06G11990 N 0.726
OBART06G15310 Oryza barthii OBART06G15310 N 0.726
OLONG_009306 Oryza longistaminata OLONG_009306 N 0.726
OMERI06G16500 Oryza meridionalis OMERI06G16500 N 0.726
OPUNC06G13990 Oryza punctata OPUNC06G13990 N 0.726
ORUFI06G16210 Oryza rufipogon ORUFI06G16210 N 0.726
OS06G0485100 Oryza sativa OS06G0485100 N 0.726
GSMUA_Achr4G18450_001 Musa acuminata GSMUA_Achr4G18450_001 N 0.725
BRADI1G42040 Brachypodium distachyon BRADI1G42040 N 0.721
mgf014854m Mimulus guttatus mgf014854m N 0.711
30209.m001510 Ricinus communis 30209.m001510 N 0.698
GRMZM2G111204 Zea mays GRMZM2G111204 N 0.677
Sb02g020940 Sorghum bicolor Sb02g020940 N 0.647
Si030167m.g Setaria italica Si030167m.g N 0.647
Pavir.Ba02980 Panicum virgatum Pavir.Ba02980 N 0.647
Pavir.Bb01334 Panicum virgatum Pavir.Bb01334 N 0.647
GRMZM2G126170 Zea mays GRMZM2G126170 N 0.646
TRIUR3_26093 Triticum urartu TRIUR3_26093 N 0.609
OLONG_009303 Oryza longistaminata OLONG_009303 N 0.601
OPUNC06G13910 Oryza punctata OPUNC06G13910 N 0.601