CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GRMZM2G111204
(
Zea mays
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
GRMZM2G111204
T218996_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G111204_P01
Homeodomain
13
76
RFLPSEVAEMEARLLQLNNGIPTRAVLQTLADKFSASPERAGKVAIQPKQVWNWFQNRRYSHRA
Links
Other
Homeodomain
family TFs
Other
Zea mays
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo5g118650
Brassica oleracea
Bo5g118650
N
0.735
GRMZM2G126170
Zea mays
GRMZM2G126170
N
0.728
Sb02g020940
Sorghum bicolor
Sb02g020940
N
0.727
Bostr.19424s0824
Boechera stricta
Bostr.19424s0824
N
0.722
Cagra.1681s0007
Capsella grandiflora
Cagra.1681s0007
N
0.722
Carubv10014092m.g
Capsella rubella
Carubv10014092m.g
N
0.722
Pavir.Ba02980
Panicum virgatum
Pavir.Ba02980
N
0.722
Pavir.Bb01334
Panicum virgatum
Pavir.Bb01334
N
0.722
Si030167m.g
Setaria italica
Si030167m.g
N
0.721
Pm011344
Prunus mume
Pm011344
N
0.711
AT3G18380
Arabidopsis thaliana
AT3G18380
N
0.710
fgenesh2_kg.3__2039__AT3G18380.2
Arabidopsis lyrata
fgenesh2_kg.3__2039__AT3G18380.2
N
0.710
SapurV1A.0083s0320
Salix purpurea
SapurV1A.0083s0320
N
0.705
GLYMA12G18490
Glycine max
GLYMA12G18490
N
0.698
SELMODRAFT_405582
Selaginella moellendorffii
SELMODRAFT_405582
N
0.683
SELMODRAFT_440103
Selaginella moellendorffii
SELMODRAFT_440103
N
0.683
Gorai.013G172000
Gossypium raimondii
Gorai.013G172000
N
0.677
Gorai.002G065900
Gossypium raimondii
Gorai.002G065900
N
0.660
Cucsa.032420
Cucumis sativus
Cucsa.032420
N
0.654
POPTR_0174s00240
Populus trichocarpa
POPTR_0174s00240
N
0.653
Bra022316
Brassica rapa
Bra022316
N
0.652
orange1.1g016887m.g
Citrus sinensis
orange1.1g016887m.g
N
0.652
TRIUR3_26093
Triticum urartu
TRIUR3_26093
N
0.637
evm.TU.supercontig_80.16
Carica papaya
evm.TU.supercontig_80.16
N
0.632
OGLUM06G16330
Oryza glumaepatula
OGLUM06G16330
N
0.626
ACAC_0000671101
Angiostrongylus cantonensis
ACAC_0000671101
N
0.614
ACOC_0000865601
Angiostrongylus costaricensis
ACOC_0000865601
N
0.614
OLONG_009303
Oryza longistaminata
OLONG_009303
N
0.612
OPUNC06G13910
Oryza punctata
OPUNC06G13910
N
0.612
GSMUA_Achr4G18450_001
Musa acuminata
GSMUA_Achr4G18450_001
N
0.610
BGLB001550
Biomphalaria glabrata
BGLB001550
N
0.609
ANCCAN_25804
Ancylostoma caninum
ANCCAN_25804
N
0.601