POPTR_0174s00240 (Populus trichocarpa)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 POPTR_0174s00240 T222590_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0174s00240.1 Homeodomain 6 58

Links

Other Homeodomain family TFs
Other Populus trichocarpa TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.032420 Cucumis sativus Cucsa.032420 N 0.863
orange1.1g016887m.g Citrus sinensis orange1.1g016887m.g N 0.853
Gorai.002G065900 Gossypium raimondii Gorai.002G065900 N 0.825
Bra022316 Brassica rapa Bra022316 N 0.814
evm.TU.supercontig_80.16 Carica papaya evm.TU.supercontig_80.16 N 0.805
SapurV1A.0083s0320 Salix purpurea SapurV1A.0083s0320 N 0.795
Pm011344 Prunus mume Pm011344 N 0.789
GLYMA12G18490 Glycine max GLYMA12G18490 N 0.775
AT3G18380 Arabidopsis thaliana AT3G18380 N 0.764
fgenesh2_kg.3__2039__AT3G18380.2 Arabidopsis lyrata fgenesh2_kg.3__2039__AT3G18380.2 N 0.764
Gorai.013G172000 Gossypium raimondii Gorai.013G172000 N 0.760
Bostr.19424s0824 Boechera stricta Bostr.19424s0824 N 0.752
Cagra.1681s0007 Capsella grandiflora Cagra.1681s0007 N 0.752
Carubv10014092m.g Capsella rubella Carubv10014092m.g N 0.752
Bo5g118650 Brassica oleracea Bo5g118650 N 0.735
GRMZM2G111204 Zea mays GRMZM2G111204 N 0.653
OGLUM06G16330 Oryza glumaepatula OGLUM06G16330 N 0.652
POPTR_0011s09970 Populus trichocarpa POPTR_0011s09970 N 0.640
TTAC_0000456101 Hydatigera taeniaeformis TTAC_0000456101 N 0.638
PK03811.1 Cannabis sativa PK03811.1 N 0.634
A_08314 Schistosoma haematobium A_08314 N 0.628
TASK_0000266001 Taenia asiatica TASK_0000266001 N 0.627
WUBG_18725 Wuchereria bancrofti WUBG_18725 N 0.625
Minc14799 Meloidogyne incognita Minc14799 N 0.625
TsM_001096000 Taenia solium TsM_001096000 N 0.624
HHAL005220-PA Halyomorpha halys HHAL005220-PA N 0.618
SMU15030938 Schmidtea mediterranea SMU15030938 N 0.618
DME_0000947201 Dracunculus medinensis DME_0000947201 N 0.618
ECPE_0000616401 Echinostoma caproni ECPE_0000616401 N 0.618
PXEA_0003344501 Protopolystoma xenopodis PXEA_0003344501 N 0.618
SCUD_0001900601 Schistosoma curassoni SCUD_0001900601 N 0.618
SMRZ_0000101601 Schistosoma margrebowiei SMRZ_0000101601 N 0.618
SMTD_0000662501 Schistosoma mattheei SMTD_0000662501 N 0.618
snap_masked-nMf.1.1.scaf05842-processed-gene-0.7 Meloidogyne floridensis snap_masked-nMf.1.1.scaf05842-processed-gene-0.7 N 0.618
SPER_0002932401 Spirometra erinaceieuropaei SPER_0002932401 N 0.618
TRE_0000350801 Trichobilharzia regenti TRE_0000350801 N 0.618
TRE_0000664901 Trichobilharzia regenti TRE_0000664901 N 0.618
GM19280 Drosophila sechellia FBgn0174180 N 0.617
SPER_0001728701 Spirometra erinaceieuropaei SPER_0001728701 N 0.617
ENSGALG00000020423 Gallus gallus ENSGALG00000020423 N 0.614
ANCCAN_19464 Ancylostoma caninum ANCCAN_19464 N 0.614
ANCDUO_16102 Ancylostoma duodenale ANCDUO_16102 N 0.614
NECAME_04746 Necator americanus NECAME_04746 N 0.614
A_05161 Schistosoma haematobium A_05161 N 0.612
ACAC_0000669701 Angiostrongylus cantonensis ACAC_0000669701 N 0.610
EVEC_0001374701 Enterobius vermicularis EVEC_0001374701 N 0.610
CpipJ_CPIJ015117 Culex pipiens CpipJ_CPIJ015117 N 0.608
CPIJ015117 Culex quinquefasciatus CPIJ015117 N 0.608
YQE_02583 Dendroctonus ponderosae YQE_02583 N 0.608
Ocbimv22022773m.g Octopus bimaculoides Ocbimv22022773m.g I 0.608
SNAPOd2T00027099001 Oikopleura dioica SNAPOd2T00027099001 N 0.608
AARA009718 Anopheles arabiensis AARA009718 N 0.608
ADIR002916 Anopheles dirus ADIR002916 N 0.608
AEPI008543 Anopheles epiroticus AEPI008543 N 0.608
AFAF003697 Anopheles farauti AFAF003697 N 0.608
AFUN006006 Anopheles funestus AFUN006006 N 0.608
AMIN003814 Anopheles minimus AMIN003814 N 0.608
ASTEI04299 Anopheles stephensi ASTEI04299 N 0.608
ANCCAN_04049 Ancylostoma caninum ANCCAN_04049 I 0.608
ANCCEY_01003 Ancylostoma ceylanicum ANCCEY_01003 I 0.608
ANCDUO_22747 Ancylostoma duodenale ANCDUO_22747 N 0.608
Hba_10254 Heterorhabditis bacteriophora Hba_10254 N 0.608
Hba_19301 Heterorhabditis bacteriophora Hba_19301 N 0.608
PXEA_0000997401 Protopolystoma xenopodis PXEA_0000997401 N 0.608
PXEA_0001530801 Protopolystoma xenopodis PXEA_0001530801 N 0.608
SCUD_0000482001 Schistosoma curassoni SCUD_0000482001 I 0.608
SMTD_0001595501 Schistosoma mattheei SMTD_0001595501 N 0.608
TsM_000403100 Taenia solium TsM_000403100 N 0.608
L596_g19867 Steinernema carpocapsae L596_g19867 N 0.607
ANCCAN_14745 Ancylostoma caninum ANCCAN_14745 N 0.602
DICVIV_01479 Dictyocaulus viviparus DICVIV_01479 N 0.602
scaffold958-EXSNAP2012.2 Pristionchus exspectatus scaffold958-EXSNAP2012.2 N 0.600