CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.19424s0824
(
Boechera stricta
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Bostr.19424s0824
T228103_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.19424s0824.1.p
Homeodomain
18
76
EVTEMEAILLQHNTAMPGRHILEALADKFSESPERKGKIVVQFKQIWNWFQNRRYALRA
Links
Other
Homeodomain
family TFs
Other
Boechera stricta
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.1681s0007
Capsella grandiflora
Cagra.1681s0007
N
0.867
Carubv10014092m.g
Capsella rubella
Carubv10014092m.g
N
0.867
AT3G18380
Arabidopsis thaliana
AT3G18380
N
0.854
fgenesh2_kg.3__2039__AT3G18380.2
Arabidopsis lyrata
fgenesh2_kg.3__2039__AT3G18380.2
N
0.854
Bo5g118650
Brassica oleracea
Bo5g118650
N
0.848
SapurV1A.0083s0320
Salix purpurea
SapurV1A.0083s0320
N
0.806
Pm011344
Prunus mume
Pm011344
N
0.805
Bra022316
Brassica rapa
Bra022316
N
0.795
GLYMA12G18490
Glycine max
GLYMA12G18490
N
0.795
Gorai.002G065900
Gossypium raimondii
Gorai.002G065900
N
0.780
Gorai.013G172000
Gossypium raimondii
Gorai.013G172000
N
0.769
orange1.1g016887m.g
Citrus sinensis
orange1.1g016887m.g
N
0.757
POPTR_0174s00240
Populus trichocarpa
POPTR_0174s00240
N
0.752
Cucsa.032420
Cucumis sativus
Cucsa.032420
N
0.752
evm.TU.supercontig_80.16
Carica papaya
evm.TU.supercontig_80.16
N
0.744
GRMZM2G111204
Zea mays
GRMZM2G111204
N
0.722
Bo1g117640
Brassica oleracea
Bo1g117640
N
0.710
Bra037587
Brassica rapa
Bra037587
N
0.710
POPTR_0011s09970
Populus trichocarpa
POPTR_0011s09970
N
0.663
PK03811.1
Cannabis sativa
PK03811.1
N
0.661
mgf014854m
Mimulus guttatus
mgf014854m
N
0.659
GSMUA_Achr4G18450_001
Musa acuminata
GSMUA_Achr4G18450_001
N
0.654
TRIUR3_26093
Triticum urartu
TRIUR3_26093
N
0.654
30209.m001510
Ricinus communis
30209.m001510
N
0.625
Ogr09559
Ophisaurus gracilis
Ogr09559
N
0.605
CBG05223
Caenorhabditis briggsae
CBG05223
N
0.601
TCM_046875
Theobroma cacao
TCM_046875
N
0.599