estExt_fgenesh1_pg.C_20336 (Sporobolomyces roseus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 estExt_fgenesh1_pg.C_20336 T227339_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NEMVEDRAFT_v1g105595
M02143_2.00 		Nematostella vectensis
NTWATWRN
NYWATWAN		 PBM
Weirauch et al.(2014)
pTH5503 		0.609 0.456
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_20336 Homeodomain 120 176

Links

Other Homeodomain family TFs
Other Sporobolomyces roseus TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL014557 Aedes aegypti AAEL014557 I 0.000
Aan_R014661 Calypte anna Aan_R014661 I 0.000
AARA011392 Anopheles arabiensis AARA011392 I 0.000
AATE001065 Anopheles atroparvus AATE001065 I 0.000
ACHR000155 Anopheles christyi ACHR000155 I 0.000
ACOM032658 Anopheles coluzzii ACOM032658 I 0.000
ACUA017710 Anopheles culicifacies ACUA017710 I 0.000
ADIR004811 Anopheles dirus ADIR004811 I 0.000
AEPI007564 Anopheles epiroticus AEPI007564 I 0.000
AFAF013388 Anopheles farauti AFAF013388 I 0.000
Afo_R003391 Aptenodytes forsteri Afo_R003391 I 0.000
AFUN005407 Anopheles funestus AFUN005407 I 0.000
AGAP009646 Anopheles gambiae AGAP009646 I 0.000
Alligator_sinensis_CCG005377.1 Alligator sinensis Alligator_sinensis_CCG005377.1 I 0.000
AMAM013513 Anopheles maculatus AMAM013513 I 0.000
AMEC005579 Anopheles melas AMEC005579 I 0.000
AMEM004604 Anopheles merus AMEM004604 I 0.000
AMIN001504 Anopheles minimus AMIN001504 I 0.000
AQUA002910 Anopheles quadriannulatus AQUA002910 I 0.000
BGIBMGA001180 Bombyx mori BGIBMGA001180 I 0.000
Brh_R008776 Buceros rhinoceros Brh_R008776 I 0.000
cad Drosophila melanogaster FBgn0000251 D 0.000
CDX1 Callithrix jacchus ENSCJAG00000021069 I 0.000
CDX1 Canis familiaris ENSCAFG00000018210 I 0.000
CDX2 Cavia porcellus ENSCPOG00000007276 I 0.000
CDX2 Callithrix jacchus ENSCJAG00000019398 I 0.000
CDX2 Canis familiaris ENSCAFG00000006742 I 0.000
Cflo_06253--XP_001122398.1_APIME Camponotus floridanus Cflo_06253--XP_001122398.1_APIME I 0.000
CGI_10023003 Crassostrea gigas CGI_10023003 I 0.000
CPIJ004813 Culex quinquefasciatus CPIJ004813 I 0.000
CpipJ_CPIJ004813 Culex pipiens CpipJ_CPIJ004813 I 0.000
DAPPUDRAFT_347219 Daphnia pulex DAPPUDRAFT_347219 I 0.000
ENSACAG00000003334 Anolis carolinensis ENSACAG00000003334 I 0.000
ENSACAG00000015334 Anolis carolinensis ENSACAG00000015334 I 0.000
ENSAMEG00000002400 Ailuropoda melanoleuca ENSAMEG00000002400 I 0.000
ENSAMEG00000004954 Ailuropoda melanoleuca ENSAMEG00000004954 I 0.000
ENSAMXG00000000767 Astyanax mexicanus ENSAMXG00000000767 I 0.000
ENSAMXG00000016994 Astyanax mexicanus ENSAMXG00000016994 I 0.000
ENSBTAG00000001819 Bos taurus ENSBTAG00000001819 I 0.000
ENSBTAG00000012014 Bos taurus ENSBTAG00000012014 I 0.000
ENSBTAP00000001222-D1 Bos grunniens ENSBTAP00000001222-D1 I 0.000
ENSCING00000007334 Ciona intestinalis ENSCING00000007334 I 0.000
ENSCPOG00000020353 Cavia porcellus ENSCPOG00000020353 I 0.000
ENSCSAG00000011659 Chlorocebus sabaeus ENSCSAG00000011659 I 0.000
ENSCSAG00000017976 Chlorocebus sabaeus ENSCSAG00000017976 I 0.000
ENSCSAVG00000007948 Ciona savignyi ENSCSAVG00000007948 I 0.000
ENSSHAG00000005971 Sarcophilus harrisii ENSSHAG00000005971 I 0.000
GA14567 Drosophila pseudoobscura FBgn0074595 I 0.000
GD24280 Drosophila simulans FBgn0195628 I 0.000
GE12346 Drosophila yakuba FBgn0230096 I 0.000
GF15355 Drosophila ananassae FBgn0092380 I 0.000
GG21252 Drosophila erecta FBgn0113432 I 0.000
GH11619 Drosophila grimshawi FBgn0119099 I 0.000
GI17922 Drosophila mojavensis FBgn0140663 I 0.000
GJ17694 Drosophila virilis FBgn0204863 I 0.000
GK14914 Drosophila willistoni FBgn0216919 I 0.000
GL18519 Drosophila persimilis FBgn0156120 I 0.000
GM23369 Drosophila sechellia FBgn0178236 I 0.000
HOXC13 Pteropus vampyrus ENSPVAG00000012296 I 0.000
Hoxc13 Rattus norvegicus ENSRNOG00000028679 I 0.000
HOXC13 Sorex araneus ENSSARG00000005621 I 0.000
HOXC13 Sus scrofa ENSSSCG00000000279 I 0.000
HOXC13 Tupaia belangeri ENSTBEG00000016269 I 0.000
HOXC13 Tursiops truncatus ENSTTRG00000004546 I 0.000
LCUP004198 Lucilia cuprina LCUP004198 I 0.000
LotgiG197335 Lottia gigantea LotgiG197335 I 0.000
MDOA015506 Musca domestica MDOA015506 I 0.000
Myotis_brandtii_HOXC13_10022976 Myotis brandtii Myotis_brandtii_HOXC13_10022976 I 0.000
NV14987 Nasonia vitripennis NV14987 I 0.000
Ogr02757 Ophisaurus gracilis Ogr02757 I 0.000
Pvit_07423 Pogona vitticeps Pvit_07423 I 0.000
Q70LF3_ARTSF Artemia franciscana Q70LF3_ARTSF D 0.000
SMAR009939 Strigamia maritima SMAR009939 I 0.000
Tal_R009649 Tyto alba Tal_R009649 I 0.000
tetur01g07680 Tetranychus urticae tetur01g07680 I 0.000
YQE_00090 Dendroctonus ponderosae YQE_00090 I 0.000
YQE_00828 Dendroctonus ponderosae YQE_00828 I 0.000
YQE_03183 Dendroctonus ponderosae YQE_03183 I 0.000