estExt_fgenesh1_pg.C_20336 (Sporobolomyces roseus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 estExt_fgenesh1_pg.C_20336 T227339_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NEMVEDRAFT_v1g105595
M02143_2.00 		Nematostella vectensis
NTWATWRN
NYWATWAN		 PBM
Weirauch et al.(2014)
pTH5503 		0.609 0.456
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_20336 Homeodomain 120 176

Links

Other Homeodomain family TFs
Other Sporobolomyces roseus TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SPPG_01974 Spizellomyces punctatus SPPG_01974 N 0.698
BATDEDRAFT_27558 Batrachochytrium dendrobatidis BATDEDRAFT_27558 I 0.698
RO3G_11930 Rhizopus oryzae RO3G_11930 I 0.697
RO3G_13360 Rhizopus oryzae RO3G_13360 I 0.697
RHTO_06229 Rhodosporidium toruloides RHTO_06229 I 0.697
RTG_01934 Rhodotorula glutinis RTG_01934 I 0.697
e_gw1.10.235.1 Phycomyces blakesleeanus e_gw1.10.235.1 I 0.697
estExt_fgenesh1_pg.C_10219 Sporobolomyces roseus estExt_fgenesh1_pg.C_10219 I 0.697
fgeneshMC_pg.2_#_8 Mucor circinelloides fgeneshMC_pg.2_#_8 I 0.697
GLOTRDRAFT_92391 Gloeophyllum trabeum GLOTRDRAFT_92391 I 0.691
fgeneshMC_pg.7_#_205 Mucor circinelloides fgeneshMC_pg.7_#_205 N 0.689
CERSUDRAFT_94820 Ceriporiopsis subvermispora CERSUDRAFT_94820 I 0.683
VSX2 Sus scrofa ENSSSCG00000002363 I 0.683
EDEG_01594 Edhazardia aedis EDEG_01594 I 0.680
MELLADRAFT_35504 Melampsora laricipopulina MELLADRAFT_35504 I 0.680
MVLG_02963 Microbotryum violaceum MVLG_02963 I 0.680
V565_070630 Rhizoctonia solani V565_070630 I 0.680
GLOINDRAFT_43985 Rhizophagus irregularis GLOINDRAFT_43985 I 0.679
PTTG_03012 Puccinia triticina PTTG_03012 I 0.679
AGABI2DRAFT_192725 Agaricus bisporus AGABI2DRAFT_192725 I 0.658
SCHCODRAFT_257987 Schizophyllum commune SCHCODRAFT_257987 I 0.658
E5Q_03771 Mixia osmundae E5Q_03771 I 0.657
PFL1_03213 Pseudozyma flocculosa PFL1_03213 I 0.653
RO3G_16164 Rhizopus oryzae RO3G_16164 N 0.652
CNJ00280 Cryptococcus neoformans CNJ00280 I 0.650
L804_00025 Cryptococcus gattii L804_00025 I 0.650
SPPG_07013 Spizellomyces punctatus SPPG_07013 N 0.648
GLOINDRAFT_235135 Rhizophagus irregularis GLOINDRAFT_235135 N 0.648
NEMVEDRAFT_v1g92785 Nematostella vectensis NEMVEDRAFT_v1g92785 N 0.634
fgeneshMC_pg.1_#_1279 Mucor circinelloides fgeneshMC_pg.1_#_1279 N 0.634
fgeneshMC_pg.7_#_41 Mucor circinelloides fgeneshMC_pg.7_#_41 I 0.634
fgeneshPB_pg.11__229 Phycomyces blakesleeanus fgeneshPB_pg.11__229 N 0.634
DI09_11p240 Microsporidia sp DI09_11p240 N 0.632
RO3G_04153 Rhizopus oryzae RO3G_04153 I 0.631
RO3G_04843 Rhizopus oryzae RO3G_04843 I 0.631
gw1.5.922.1 Mucor circinelloides gw1.5.922.1 I 0.631
PAN0_021c6005 Pseudozyma antarctica PAN0_021c6005 N 0.628
PHSY_002545 Pseudozyma hubeiensis PHSY_002545 N 0.628
PSEUBRA_SCAF22g00024 Pseudozyma brasiliensis PSEUBRA_SCAF22g00024 N 0.628
sr13171 Sporisorium reilianum sr13171 N 0.628
UHOR_03270 Ustilago hordei UHOR_03270 N 0.628
UM06283 Ustilago maydis UM06283 N 0.628
RO3G_12689 Rhizopus oryzae RO3G_12689 I 0.619
gw1.2.930.1 Phycomyces blakesleeanus gw1.2.930.1 I 0.619
MVLG_02993 Microbotryum violaceum MVLG_02993 I 0.611
NEMVEDRAFT_v1g105595 Nematostella vectensis NEMVEDRAFT_v1g105595 D 0.609
ML319810a Mnemiopsis leidyi ML319810a N 0.602
SPPG_05154 Spizellomyces punctatus SPPG_05154 N 0.600