CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PSEUBRA_SCAF22g00024
(
Pseudozyma brasiliensis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
PSEUBRA_SCAF22g00024
T222731_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EST07027
Homeodomain
125
181
IKHRRRTTKTQFRVLESTFREIPKPNAALRKQISAQLDMPVRAVQIWFQNRRAKAKA
Links
Other
Homeodomain
family TFs
Other
Pseudozyma brasiliensis
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PAN0_021c6005
Pseudozyma antarctica
PAN0_021c6005
N
0.867
PHSY_002545
Pseudozyma hubeiensis
PHSY_002545
N
0.867
sr13171
Sporisorium reilianum
sr13171
N
0.867
UM06283
Ustilago maydis
UM06283
N
0.867
UHOR_03270
Ustilago hordei
UHOR_03270
N
0.865
PFL1_03213
Pseudozyma flocculosa
PFL1_03213
I
0.807
fgeneshPB_pg.11__229
Phycomyces blakesleeanus
fgeneshPB_pg.11__229
N
0.782
RO3G_11930
Rhizopus oryzae
RO3G_11930
I
0.767
RO3G_13360
Rhizopus oryzae
RO3G_13360
I
0.767
fgeneshMC_pg.1_#_1279
Mucor circinelloides
fgeneshMC_pg.1_#_1279
N
0.764
e_gw1.10.235.1
Phycomyces blakesleeanus
e_gw1.10.235.1
I
0.755
fgeneshMC_pg.2_#_8
Mucor circinelloides
fgeneshMC_pg.2_#_8
I
0.755
fgeneshMC_pg.7_#_205
Mucor circinelloides
fgeneshMC_pg.7_#_205
N
0.745
estExt_fgenesh1_pg.C_10219
Sporobolomyces roseus
estExt_fgenesh1_pg.C_10219
I
0.720
fgeneshMC_pg.7_#_41
Mucor circinelloides
fgeneshMC_pg.7_#_41
I
0.718
V565_070630
Rhizoctonia solani
V565_070630
I
0.717
SPPG_01974
Spizellomyces punctatus
SPPG_01974
N
0.714
E5Q_03771
Mixia osmundae
E5Q_03771
I
0.709
RO3G_16164
Rhizopus oryzae
RO3G_16164
N
0.707
GLOINDRAFT_43985
Rhizophagus irregularis
GLOINDRAFT_43985
I
0.704
PTTG_03012
Puccinia triticina
PTTG_03012
I
0.702
AGABI2DRAFT_192725
Agaricus bisporus
AGABI2DRAFT_192725
I
0.690
SCHCODRAFT_257987
Schizophyllum commune
SCHCODRAFT_257987
I
0.690
EDEG_01594
Edhazardia aedis
EDEG_01594
I
0.689
MVLG_02963
Microbotryum violaceum
MVLG_02963
I
0.687
CNJ00280
Cryptococcus neoformans
CNJ00280
I
0.677
DI09_11p240
Microsporidia sp
DI09_11p240
N
0.677
L804_00025
Cryptococcus gattii
L804_00025
I
0.677
RHTO_06229
Rhodosporidium toruloides
RHTO_06229
I
0.675
RTG_01934
Rhodotorula glutinis
RTG_01934
I
0.675
CERSUDRAFT_94820
Ceriporiopsis subvermispora
CERSUDRAFT_94820
I
0.672
MELLADRAFT_35504
Melampsora laricipopulina
MELLADRAFT_35504
I
0.671
GLOTRDRAFT_92391
Gloeophyllum trabeum
GLOTRDRAFT_92391
I
0.669
GLOINDRAFT_235135
Rhizophagus irregularis
GLOINDRAFT_235135
N
0.658
J056_004115
Wallemia ichthyophaga
J056_004115
I
0.653
WALSEDRAFT_59197
Wallemia sebi
WALSEDRAFT_59197
I
0.653
RO3G_03200
Rhizopus oryzae
RO3G_03200
I
0.631
estExt_fgenesh1_pg.C_20336
Sporobolomyces roseus
estExt_fgenesh1_pg.C_20336
I
0.628
RO3G_10313
Rhizopus oryzae
RO3G_10313
N
0.616
fgeneshPB_pg.11__204
Phycomyces blakesleeanus
fgeneshPB_pg.11__204
N
0.614
fgeneshMC_pg.3_#_403
Mucor circinelloides
fgeneshMC_pg.3_#_403
N
0.610
RO3G_03860
Rhizopus oryzae
RO3G_03860
N
0.608
SPPG_07013
Spizellomyces punctatus
SPPG_07013
N
0.605
NBO_6g0031
Nosema bombycis
NBO_6g0031
I
0.599