CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgeneshHS_pg.C_370078
(
Naegleria gruberi
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
estExt_fgeneshHS_pg.C_370078
T227411_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgeneshHS_pg.C_370078
Homeodomain
94
126
FSEDEKKGLVDQTTLSLLQINNWFSNKRVRYKR
Links
Other
Homeodomain
family TFs
Other
Naegleria gruberi
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSGACG00000004248
Gasterosteus aculeatus
ENSGACG00000004248
N
ENSGACG00000007639
Gasterosteus aculeatus
ENSGACG00000007639
N
ENSGMOG00000000095
Gadus morhua
ENSGMOG00000000095
N
ENSLOCG00000004031
Lepisosteus oculatus
ENSLOCG00000004031
N
ENSONIG00000002752
Oreochromis niloticus
ENSONIG00000002752
N
ENSONIG00000019760
Oreochromis niloticus
ENSONIG00000019760
N
ENSORLG00000006471
Oryzias latipes
ENSORLG00000006471
N
ENSPFOG00000006642
Poecilia formosa
ENSPFOG00000006642
N
ENSPFOG00000008123
Poecilia formosa
ENSPFOG00000008123
I
ENSTNIG00000018468
Tetraodon nigroviridis
ENSTNIG00000018468
N
ENSTRUG00000013996
Takifugu rubripes
ENSTRUG00000013996
N
ENSTRUG00000015234
Takifugu rubripes
ENSTRUG00000015234
N
ENSXMAG00000010541
Xiphophorus maculatus
ENSXMAG00000010541
N
ENSXMAG00000015008
Xiphophorus maculatus
ENSXMAG00000015008
I
kmt2bb
Danio rerio
ENSDARG00000060697
N