fgenesh1_pg.C_scaffold_13000227 (Phanerochaete chrysosporium)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 fgenesh1_pg.C_scaffold_13000227 T227465_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_13000227 Homeodomain 40 96
fgenesh1_pg.C_scaffold_13000227 Homeodomain 189 247
fgenesh1_pg.C_scaffold_13000227 Homeodomain 339 395

Links

Other Homeodomain family TFs
Other Phanerochaete chrysosporium TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00021p00218190 Amborella trichopoda AMTR_s00021p00218190 N 0.000
AMTR_s00057p00091350 Amborella trichopoda AMTR_s00057p00091350 I 0.000
Aquca_015_00350 Aquilegia coerulea Aquca_015_00350 N 0.000
BGIOSGA022580 Oryza indica BGIOSGA022580 I 0.000
BRADI2G40920 Brachypodium distachyon BRADI2G40920 N 0.000
F775_07483 Aegilops tauschii F775_07483 I 0.000
gene13055-v1.0-hybrid Fragaria vesca gene13055-v1.0-hybrid N 0.000
GRMZM2G392306 Zea mays GRMZM2G392306 I 0.000
GSMUA_Achr8G13370_001 Musa acuminata GSMUA_Achr8G13370_001 N 0.000
LPERR06G07570 Leersia perrieri LPERR06G07570 I 0.000
MLOC_12609 Hordeum vulgare MLOC_12609 I 0.000
MLOC_59560 Hordeum vulgare MLOC_59560 I 0.000
MTR_5g024070 Medicago truncatula MTR_5g024070 N 0.000
OB06G17750 Oryza brachyantha OB06G17750 I 0.000
OMERI06G09770 Oryza meridionalis OMERI06G09770 I 0.000
ONIVA06G09450 Oryza nivara ONIVA06G09450 I 0.000
OPUNC06G07940 Oryza punctata OPUNC06G07940 I 0.000
ORGLA06G0077700 Oryza glaberrima ORGLA06G0077700 I 0.000
ORUFI06G08510 Oryza rufipogon ORUFI06G08510 I 0.000
OS06G0228950 Oryza sativa OS06G0228950 I 0.000
Pavir.Ab02992 Panicum virgatum Pavir.Ab02992 I 0.000
Pavir.Da01160 Panicum virgatum Pavir.Da01160 I 0.000
Pavir.Ea01492 Panicum virgatum Pavir.Ea01492 N 0.000
Pavir.Eb01347 Panicum virgatum Pavir.Eb01347 N 0.000
Pavir.J13146 Panicum virgatum Pavir.J13146 I 0.000
PDK_20s1788591g001 Phoenix dactylifera PDK_20s1788591g001 N 0.000
RKD5 Arabidopsis thaliana AT4G35590 N 0.000
Sb10g008120 Sorghum bicolor Sb10g008120 I 0.000
SELMODRAFT_408627 Selaginella moellendorffii SELMODRAFT_408627 N 0.000
SELMODRAFT_73108 Selaginella moellendorffii SELMODRAFT_73108 N 0.000
SELMODRAFT_73109 Selaginella moellendorffii SELMODRAFT_73109 N 0.000
SELMODRAFT_73110 Selaginella moellendorffii SELMODRAFT_73110 N 0.000
SELMODRAFT_73111 Selaginella moellendorffii SELMODRAFT_73111 N 0.000
SELMODRAFT_73112 Selaginella moellendorffii SELMODRAFT_73112 N 0.000
SELMODRAFT_73113 Selaginella moellendorffii SELMODRAFT_73113 N 0.000
SELMODRAFT_73116 Selaginella moellendorffii SELMODRAFT_73116 N 0.000
SELMODRAFT_73117 Selaginella moellendorffii SELMODRAFT_73117 N 0.000
SELMODRAFT_73118 Selaginella moellendorffii SELMODRAFT_73118 N 0.000
SELMODRAFT_73278 Selaginella moellendorffii SELMODRAFT_73278 N 0.000
Si005102m.g Setaria italica Si005102m.g N 0.000
Si008273m.g Setaria italica Si008273m.g I 0.000
Si020172m.g Setaria italica Si020172m.g I 0.000
Traes_7DS_405F08A53 Triticum aestivum Traes_7DS_405F08A53 I 0.000
TRIUR3_19503 Triticum urartu TRIUR3_19503 I 0.000