Carubv10002996m.g (Capsella rubella)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Carubv10002996m.g T228277_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK25011.1
M01253_2.00 		Cannabis sativa
NNWYRMDBNN
NNVHKYRWNN		 PBM
Lambert et al.(2019)
pTH11258 		0.679 0.825
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10002996m Homeodomain 20 76

Links

Other Homeodomain family TFs
Other Capsella rubella TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_214436 Agaricus bisporus AGABI2DRAFT_214436 N 0.000
BOTBODRAFT_172908 Botryobasidium botryosum BOTBODRAFT_172908 N 0.000
BOTBODRAFT_69421 Botryobasidium botryosum BOTBODRAFT_69421 N 0.000
CERSUDRAFT_110761 Ceriporiopsis subvermispora CERSUDRAFT_110761 N 0.000
CY34DRAFT_25000 Suillus luteus CY34DRAFT_25000 N 0.000
estExt_Genewise1Plus.C_10795 Heterobasidion annosum estExt_Genewise1Plus.C_10795 N 0.000
FOMPIDRAFT_1035071 Fomitopsis pinicola FOMPIDRAFT_1035071 N 0.000
GALMADRAFT_233700 Galerina marginata GALMADRAFT_233700 N 0.000
GLOTRDRAFT_68601 Gloeophyllum trabeum GLOTRDRAFT_68601 N 0.000
HETIRDRAFT_468737 Heterobasidion irregulare HETIRDRAFT_468737 N 0.000
JAAARDRAFT_203058 Jaapia argillacea JAAARDRAFT_203058 N 0.000
K443DRAFT_673799 Laccaria amethystina K443DRAFT_673799 N 0.000
LACBIDRAFT_300743 Laccaria bicolor LACBIDRAFT_300743 N 0.000
M378DRAFT_155674 Amanita muscaria M378DRAFT_155674 N 0.000
M404DRAFT_134644 Pisolithus tinctorius M404DRAFT_134644 N 0.000
M407DRAFT_26135 Tulasnella calospora M407DRAFT_26135 N 0.000
M407DRAFT_29482 Tulasnella calospora M407DRAFT_29482 N 0.000
M408DRAFT_325789 Serendipita vermifera M408DRAFT_325789 N 0.000
M413DRAFT_439826 Hebeloma cylindrosporum M413DRAFT_439826 N 0.000
Moror_1245 Moniliophthora roreri Moror_1245 N 0.000
PAXRUDRAFT_157512 Paxillus rubicundulus PAXRUDRAFT_157512 N 0.000
PHACADRAFT_247554 Phanerochaete carnosa PHACADRAFT_247554 N 0.000
PHLGIDRAFT_83469 Phlebiopsis gigantea PHLGIDRAFT_83469 N 0.000
PIIN_04099 Piriformospora indica PIIN_04099 N 0.000
PILCRDRAFT_817327 Piloderma croceum PILCRDRAFT_817327 N 0.000
PLEOSDRAFT_49413 Pleurotus ostreatus PLEOSDRAFT_49413 N 0.000
SCHCODRAFT_49649 Schizophyllum commune SCHCODRAFT_49649 N 0.000
SCLCIDRAFT_108680 Scleroderma citrinum SCLCIDRAFT_108680 N 0.000
SERLA73DRAFT_49851 Serpula lacrymans SERLA73DRAFT_49851 N 0.000
V565_027830 Rhizoctonia solani V565_027830 N 0.000
V565_176710 Rhizoctonia solani V565_176710 N 0.000