Lus10025454.g (Linum usitatissimum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Lus10025454.g T228906_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RLT1
M02038_2.00 		Arabidopsis thaliana
NDHTCWWN
NWWGADHN		 PBM
Weirauch et al.(2014)
pTH5432 		0.832 0.807
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10025454 Homeodomain 30 86

Links

Other Homeodomain family TFs
Other Linum usitatissimum TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BHLH51 Arabidopsis thaliana AT2G40200 N 0.000
Bo3g034790 Brassica oleracea Bo3g034790 N 0.000
Bo4g188890 Brassica oleracea Bo4g188890 N 0.000
Bostr.23794s0037 Boechera stricta Bostr.23794s0037 N 0.000
Bra000177 Brassica rapa Bra000177 I 0.000
Bra017024 Brassica rapa Bra017024 N 0.000
Cagra.7053s0004 Capsella grandiflora Cagra.7053s0004 N 0.000
Carubv10023707m.g Capsella rubella Carubv10023707m.g N 0.000
fgenesh2_kg.108__1__AT2G40200.1 Arabidopsis lyrata fgenesh2_kg.108__1__AT2G40200.1 I 0.000
fgenesh2_kg.4__2126__AT2G40200.1 Arabidopsis lyrata fgenesh2_kg.4__2126__AT2G40200.1 N 0.000
Gorai.011G292100 Gossypium raimondii Gorai.011G292100 I 0.000