orange1.1g004454m.g (Citrus sinensis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 orange1.1g004454m.g T229140_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RLT1
M02038_2.00 		Arabidopsis thaliana
NDHTCWWN
NWWGADHN		 PBM
Weirauch et al.(2014)
pTH5432 		0.668 0.754
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g004454m Homeodomain 22 78

Links

Other Homeodomain family TFs
Other Citrus sinensis TFs

131 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R010039 Calypte anna Aan_R010039 I 0.000
Afo_R012751 Aptenodytes forsteri Afo_R012751 I 0.000
Cmyd_10018130 Chelonia mydas Cmyd_10018130 I 0.000
DICVIV_13476 Dictyocaulus viviparus DICVIV_13476 I 0.000
ENSACAG00000008631 Anolis carolinensis ENSACAG00000008631 I 0.000
ENSAMEG00000009347 Ailuropoda melanoleuca ENSAMEG00000009347 I 0.000
ENSAMEG00000014907 Ailuropoda melanoleuca ENSAMEG00000014907 I 0.000
ENSBTAG00000035623 Bos taurus ENSBTAG00000035623 I 0.000
ENSBTAG00000036115 Bos taurus ENSBTAG00000036115 I 0.000
ENSBTAG00000036343 Bos taurus ENSBTAG00000036343 I 0.000
ENSBTAG00000045938 Bos taurus ENSBTAG00000045938 I 0.000
ENSBTAG00000046306 Bos taurus ENSBTAG00000046306 I 0.000
ENSBTAG00000047168 Bos taurus ENSBTAG00000047168 I 0.000
ENSBTAP00000047496-D1 Bos grunniens ENSBTAP00000047496-D1 I 0.000
ENSCAFG00000023024 Canis familiaris ENSCAFG00000023024 I 0.000
ENSCAFG00000023067 Canis familiaris ENSCAFG00000023067 I 0.000
ENSCAFG00000025411 Canis familiaris ENSCAFG00000025411 I 0.000
ENSCAFG00000029639 Canis familiaris ENSCAFG00000029639 I 0.000
ENSCAFG00000031919 Canis familiaris ENSCAFG00000031919 I 0.000
ENSCJAG00000004097 Callithrix jacchus ENSCJAG00000004097 I 0.000
ENSCSAG00000007182 Chlorocebus sabaeus ENSCSAG00000007182 I 0.000
ENSCSAG00000018308 Chlorocebus sabaeus ENSCSAG00000018308 I 0.000
ENSDNOG00000015218 Dasypus novemcinctus ENSDNOG00000015218 I 0.000
ENSDNOG00000043873 Dasypus novemcinctus ENSDNOG00000043873 I 0.000
ENSDNOG00000045058 Dasypus novemcinctus ENSDNOG00000045058 I 0.000
ENSECAG00000000093 Equus caballus ENSECAG00000000093 I 0.000
ENSECAG00000008677 Equus caballus ENSECAG00000008677 I 0.000
ENSECAG00000008708 Equus caballus ENSECAG00000008708 I 0.000
ENSECAG00000009495 Equus caballus ENSECAG00000009495 I 0.000
ENSFALG00000008921 Ficedula albicollis ENSFALG00000008921 I 0.000
ENSFCAG00000025614 Felis catus ENSFCAG00000025614 I 0.000
ENSGALG00000019262 Gallus gallus ENSGALG00000019262 I 0.000
ENSGGOG00000022734 Gorilla gorilla ENSGGOG00000022734 I 0.000
ENSGGOG00000024390 Gorilla gorilla ENSGGOG00000024390 I 0.000
ENSLACG00000012431 Latimeria chalumnae ENSLACG00000012431 I 0.000
ENSLAFG00000016976 Loxodonta africana ENSLAFG00000016976 I 0.000
ENSLOCG00000014483 Lepisosteus oculatus ENSLOCG00000014483 I 0.000
ENSMEUG00000003908 Macropus eugenii ENSMEUG00000003908 I 0.000
ENSMLUG00000015387 Myotis lucifugus ENSMLUG00000015387 I 0.000
ENSMLUG00000022730 Myotis lucifugus ENSMLUG00000022730 I 0.000
ENSMLUG00000024907 Myotis lucifugus ENSMLUG00000024907 I 0.000
ENSMMUG00000002887 Macaca mulatta ENSMMUG00000002887 I 0.000
ENSMODG00000027398 Monodelphis domestica ENSMODG00000027398 I 0.000
ENSMODG00000028107 Monodelphis domestica ENSMODG00000028107 I 0.000
ENSNLEG00000013483 Nomascus leucogenys ENSNLEG00000013483 I 0.000
ENSOANG00000001091 Ornithorhynchus anatinus ENSOANG00000001091 I 0.000
ENSOANG00000012192 Ornithorhynchus anatinus ENSOANG00000012192 I 0.000
ENSOANG00000028803 Ornithorhynchus anatinus ENSOANG00000028803 I 0.000
ENSP00000359444 Macaca fascicularis ENSP00000359444 I 0.000
ENSPANG00000004032 Papio anubis ENSPANG00000004032 I 0.000
ENSPPYG00000020808 Pongo abelii ENSPPYG00000020808 I 0.000
ENSPTRG00000028817 Pan troglodytes ENSPTRG00000028817 I 0.000
ENSSSCG00000012734 Sus scrofa ENSSSCG00000012734 I 0.000
ENSTGUG00000006065 Taeniopygia guttata ENSTGUG00000006065 I 0.000
ENSTGUG00000006066 Taeniopygia guttata ENSTGUG00000006066 I 0.000
ENSVPAG00000003263 Vicugna pacos ENSVPAG00000003263 I 0.000
ENSVPAG00000003548 Vicugna pacos ENSVPAG00000003548 I 0.000
ENSVPAG00000004400 Vicugna pacos ENSVPAG00000004400 I 0.000
ENSVPAG00000004668 Vicugna pacos ENSVPAG00000004668 I 0.000
ENSVPAG00000004671 Vicugna pacos ENSVPAG00000004671 I 0.000
ENSVPAG00000005620 Vicugna pacos ENSVPAG00000005620 I 0.000
ENSVPAG00000006426 Vicugna pacos ENSVPAG00000006426 I 0.000
ENSVPAG00000007875 Vicugna pacos ENSVPAG00000007875 I 0.000
ENSVPAG00000007931 Vicugna pacos ENSVPAG00000007931 I 0.000
Gfo_R015011 Geospiza fortis Gfo_R015011 I 0.000
Gfo_R015012 Geospiza fortis Gfo_R015012 I 0.000
HSFX1 Homo sapiens ENSG00000171116 I 0.000
HSFX2 Homo sapiens ENSG00000268738 I 0.000
HSFY1 Homo sapiens ENSG00000172468 D 0.000
Hsfy2 Rattus norvegicus ENSRNOG00000038569 I 0.000
Hsfy2 Mus musculus ENSMUSG00000045336 I 0.000
HSFY2 Homo sapiens ENSG00000169953 D 0.000
Ogr08578 Ophisaurus gracilis Ogr08578 I 0.000
Pvit_14501 Pogona vitticeps Pvit_14501 I 0.000
Tal_R002418 Tyto alba Tal_R002418 I 0.000
Tal_R003042 Tyto alba Tal_R003042 I 0.000