AAG42360 (Xenopus laevis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 AAG42360 T229644_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Six4
M00461_2.00 		Mus musculus
NNKABMHNN
NNDKVTMNN		 PBM
Berger et al.(2008)
Six4_2860 		0.669 0.913
SIX4
M04939_2.00 		Homo sapiens
NVYGATACVB
VBGTATCRBN		 SELEX
Yin et al.(2017)
SIX4_eDBD_HT-SELEX 		0.669 0.913
Six4
M09198_2.00 		Mus musculus
DGDAABHNSASNNN
NNNSTSNDVTTHCH		 Misc
Kulakovskiy et al.(2013)
SIX4_MOUSE.H11MO.0.C 		0.669 0.913
SIX4
M10646_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX4_Q3 		0.669 0.913
SIX4
M04940_2.00 		Homo sapiens
NBGTAWCRHN
NDYGWTACVN		 SELEX
Yin et al.(2017)
SIX4_eDBD_Methyl-HT-SELEX 		0.669 0.913
Six4
M00563_2.00 		Drosophila melanogaster
NNDANMHNN
NNDKNTHNN		 PBM
Busser et al.(2012a)
Six4 		0.668 0.761
Six4
M06530_2.00 		Drosophila melanogaster
TGABAC
GTVTCA		 B1H
Mathelier et al.(2014)
MA0204.1 		0.668 0.761
Six4
M06334_2.00 		Drosophila melanogaster
WDDTGABAC
GTVTCAHHW		 B1H
Zhu et al.(2011)
Six4_Cell_FBgn0027364 		0.668 0.761
Six4
M06335_2.00 		Drosophila melanogaster
NTGAKACB
VGTMTCAN		 B1H
Zhu et al.(2011)
Six4_SOLEXA_2_FBgn0027364 		0.668 0.761
Six4
M06336_2.00 		Drosophila melanogaster
NNNTGABA
TVTCANNN		 B1H
Zhu et al.(2011)
Six4_SOLEXA_FBgn0027364 		0.668 0.761
SIX5
M08208_2.00 		Homo sapiens
GARWTGTAGT
ACTACAWYTC		 ChIP-seq
Contrino et al.(2012)
Mv121 		0.667 0.739
SIX5
M08209_2.00 		Homo sapiens
GGAGTTGT
ACAACTCC		 ChIP-seq
Contrino et al.(2012)
Mv123 		0.667 0.739
SIX5
M10738_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX5_01 		0.667 0.739
SIX5
M10739_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX5_02 		0.667 0.739
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAG42360 Homeodomain 118 163

Links

Other Homeodomain family TFs
Other Xenopus laevis TFs

207 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL010327 Aedes aegypti AAEL010327 I 0.668
AAG42361 Xenopus laevis AAG42361 N 0.771
AALB010817 Anopheles albimanus AALB010817 I 0.668
Aan_R001649 Calypte anna Aan_R001649 I 0.669
AARA005499 Anopheles arabiensis AARA005499 I 0.668
AATE008460 Anopheles atroparvus AATE008460 I 0.668
ACEP26590 Atta cephalotes ACEP26590 I 0.668
ACOM023033 Anopheles coluzzii ACOM023033 I 0.668
ACUA023926 Anopheles culicifacies ACUA023926 I 0.668
ACYPI010082 Acyrthosiphon pisum ACYPI010082 I 0.668
ADAC000140 Anopheles darlingi ADAC000140 I 0.668
ADIR002306 Anopheles dirus ADIR002306 I 0.668
AEPI002096 Anopheles epiroticus AEPI002096 I 0.668
AFAF011509 Anopheles farauti AFAF011509 I 0.668
Afo_R010343 Aptenodytes forsteri Afo_R010343 I 0.669
AFUN004151 Anopheles funestus AFUN004151 I 0.668
AGAP011065 Anopheles gambiae AGAP011065 I 0.668
AGAP011067 Anopheles gambiae AGAP011067 I 0.668
ALUE_0000011401 Ascaris lumbricoides ALUE_0000011401 I 0.601
ALUE_0001616301 Ascaris lumbricoides ALUE_0001616301 I 0.601
AMEC008377 Anopheles melas AMEC008377 I 0.668
AMEM005184 Anopheles merus AMEM005184 I 0.668
AMIN008523 Anopheles minimus AMIN008523 I 0.668
ANCCAN_20712 Ancylostoma caninum ANCCAN_20712 I 0.612
ANCDUO_14963 Ancylostoma duodenale ANCDUO_14963 I 0.612
AQUA001156 Anopheles quadriannulatus AQUA001156 I 0.668
ASIS016521 Anopheles sinensis ASIS016521 I 0.668
ASTEI05569 Anopheles stephensi ASTEI05569 I 0.668
ASU_04955 Ascaris suum ASU_04955 I 0.601
A_05252 Schistosoma haematobium A_05252 I 0.602
A_06874 Schistosoma haematobium A_06874 I 0.610
BGIBMGA000091 Bombyx mori BGIBMGA000091 I 0.668
BGLB013708 Biomphalaria glabrata BGLB013708 I 0.663
CapteG227938 Capitella teleta CapteG227938 I 0.668
CBG04628 Caenorhabditis briggsae CBG04628 I 0.601
CBG06764 Caenorhabditis briggsae CBG06764 I 0.636
CBN13130 Caenorhabditis brenneri CBN13130 I 0.636
CBN23950 Caenorhabditis brenneri CBN23950 I 0.601
ceh-33 Caenorhabditis elegans WBGene00000454 I 0.636
Cflo_08297--XP_001120698.1_APIME Camponotus floridanus Cflo_08297--XP_001120698.1_APIME I 0.668
CGI_10022945 Crassostrea gigas CGI_10022945 I 0.668
CGOC_0001175101 Cylicostephanus goldi CGOC_0001175101 I 0.612
CJA00270 Caenorhabditis japonica CJA00270 I 0.609
Cmyd_10008495 Chelonia mydas Cmyd_10008495 I 0.669
CPIJ007957 Culex quinquefasciatus CPIJ007957 I 0.668
CpipJ_CPIJ007957 Culex pipiens CpipJ_CPIJ007957 I 0.668
csin101618 Clonorchis sinensis csin101618 I 0.628
DAPPUDRAFT_27769 Daphnia pulex DAPPUDRAFT_27769 I 0.838
DILT_0001065601 Diphyllobothrium latum DILT_0001065601 I 0.619
DME_0000792901 Dracunculus medinensis DME_0000792901 I 0.601
EmuJ_000130200 Echinococcus multilocularis EmuJ_000130200 I 0.619
ENSAMEG00000000785 Ailuropoda melanoleuca ENSAMEG00000000785 I 0.667
ENSAMEG00000002968 Ailuropoda melanoleuca ENSAMEG00000002968 I 0.669
ENSAMXG00000015232 Astyanax mexicanus ENSAMXG00000015232 I 0.668
ENSAMXG00000019352 Astyanax mexicanus ENSAMXG00000019352 I 0.669
ENSAPLG00000008107 Anas platyrhynchos ENSAPLG00000008107 I 0.669
ENSBTAP00000017753-D1 Bos grunniens ENSBTAP00000017753-D1 I 0.667
ENSCPOG00000014392 Cavia porcellus ENSCPOG00000014392 I 0.669
ENSCSAG00000003151 Chlorocebus sabaeus ENSCSAG00000003151 I 0.667
ENSCSAG00000014171 Chlorocebus sabaeus ENSCSAG00000014171 I 0.669
ENSCSAVG00000001518 Ciona savignyi ENSCSAVG00000001518 I 0.642
ENSEEUG00000006684 Erinaceus europaeus ENSEEUG00000006684 I 0.667
ENSFALG00000003446 Ficedula albicollis ENSFALG00000003446 I 0.669
ENSGMOG00000008067 Gadus morhua ENSGMOG00000008067 I 0.666
ENSGMOG00000010829 Gadus morhua ENSGMOG00000010829 I 0.674
ENSLACG00000013126 Latimeria chalumnae ENSLACG00000013126 I 0.669
ENSLACG00000018526 Latimeria chalumnae ENSLACG00000018526 I 0.669
ENSLOCG00000010093 Lepisosteus oculatus ENSLOCG00000010093 I 0.669
ENSLOCG00000014840 Lepisosteus oculatus ENSLOCG00000014840 I 0.659
ENSMEUG00000015192 Macropus eugenii ENSMEUG00000015192 I 0.669
ENSMICG00000001845 Microcebus murinus ENSMICG00000001845 I 0.667
ENSMMUG00000001640 Macaca mulatta ENSMMUG00000001640 I 0.669
ENSMMUG00000016455 Macaca mulatta ENSMMUG00000016455 I 0.667
ENSMPUG00000005715 Mustela putorius furo ENSMPUG00000005715 I 0.667
ENSOANG00000013518 Ornithorhynchus anatinus ENSOANG00000013518 I 0.667
ENSOARG00000021130 Ovis aries ENSOARG00000021130 I 0.669
ENSONIG00000003682 Oreochromis niloticus ENSONIG00000003682 I 0.681
ENSONIG00000020117 Oreochromis niloticus ENSONIG00000020117 I 0.668
ENSPANG00000005316 Papio anubis ENSPANG00000005316 I 0.667
ENSPANG00000020970 Papio anubis ENSPANG00000020970 I 0.669
ENSPFOG00000004053 Poecilia formosa ENSPFOG00000004053 I 0.668
ENSPFOG00000009796 Poecilia formosa ENSPFOG00000009796 I 0.681
ENSPMAG00000009968 Petromyzon marinus ENSPMAG00000009968 I 0.724
ENSPMAG00000010180 Petromyzon marinus ENSPMAG00000010180 N 0.726
ENSPPYG00000005875 Pongo abelii ENSPPYG00000005875 I 0.669
ENSPPYG00000010131 Pongo abelii ENSPPYG00000010131 I 0.667
ENSSHAG00000016030 Sarcophilus harrisii ENSSHAG00000016030 I 0.669
ENSSTOG00000028295 Ictidomys tridecemlineatus ENSSTOG00000028295 I 0.667
ENSSTOG00000029039 Ictidomys tridecemlineatus ENSSTOG00000029039 I 0.669
ENSTSYG00000001908 Tarsius syrichta ENSTSYG00000001908 I 0.669
ENSTTRG00000001084 Tursiops truncatus ENSTTRG00000001084 I 0.638
ENSXMAG00000004315 Xiphophorus maculatus ENSXMAG00000004315 I 0.681
ENSXMAG00000013480 Xiphophorus maculatus ENSXMAG00000013480 I 0.668
GA17741 Drosophila pseudoobscura FBgn0077751 I 0.668
GB55286 Apis mellifera GB55286 I 0.621
GD12161 Drosophila simulans FBgn0183898 I 0.668
GE22381 Drosophila yakuba FBgn0239604 I 0.668
GE22732 Drosophila yakuba FBgn0239938 I 0.668
GF24111 Drosophila ananassae FBgn0101105 I 0.668
GG13283 Drosophila erecta FBgn0105555 I 0.668
GH14784 Drosophila grimshawi FBgn0122260 I 0.668
GI11887 Drosophila mojavensis FBgn0134645 I 0.668
GJ13766 Drosophila virilis FBgn0200986 I 0.668
GK12359 Drosophila willistoni FBgn0214369 I 0.668
GL12751 Drosophila persimilis FBgn0150357 I 0.655
GM22186 Drosophila sechellia FBgn0177057 I 0.668
HDID_0000865801 Hymenolepis diminuta HDID_0000865801 I 0.619
HelroG143898 Helobdella robusta HelroG143898 I 0.671
HelroG72129 Helobdella robusta HelroG72129 I 0.638
HmN_000307400 Hymenolepis microstoma HmN_000307400 I 0.619
HPBE_0001084301 Heligmosomoides bakeri HPBE_0001084301 I 0.612
HPLM_0001489701 Haemonchus placei HPLM_0001489701 I 0.612
Hsal_06384--XP_001120698.1_APIME Harpegnathos saltator Hsal_06384--XP_001120698.1_APIME I 0.668
ISCW023235 Ixodes scapularis ISCW023235 I 0.650
KGM_20665 Danaus plexippus KGM_20665 I 0.668
L798_10542 Zootermopsis nevadensis L798_10542 I 0.660
L898_g28442 Steinernema monticolum L898_g28442 I 0.618
LCUP015129 Lucilia cuprina LCUP015129 I 0.668
LDEC015106 Leptinotarsa decemlineata LDEC015106 I 0.668
LDEC016907 Leptinotarsa decemlineata LDEC016907 I 0.668
LotgiG115798 Lottia gigantea LotgiG115798 I 0.668
MCINX003783 Melitaea cinxia MCINX003783 I 0.668
MDOA003378 Musca domestica MDOA003378 I 0.668
Myotis_brandtii_SIX4_10027187 Myotis brandtii Myotis_brandtii_SIX4_10027187 I 0.669
NBR_0000072001 Nippostrongylus brasiliensis NBR_0000072001 I 0.612
nRc.2.0.1.g08154 Romanomermis culicivorax nRc.2.0.1.g08154 I 0.599
NV11991 Nasonia vitripennis NV11991 I 0.667
Ocbimv22032757m.g Octopus bimaculoides Ocbimv22032757m.g I 0.668
Ogr08726 Ophisaurus gracilis Ogr08726 I 0.669
PHUM363270 Pediculus humanus PHUM363270 I 0.604
PTRK_0000425200 Parastrongyloides trichosuri PTRK_0000425200 I 0.633
Pvit_16914 Pogona vitticeps Pvit_16914 I 0.663
Pvit_17416 Pogona vitticeps Pvit_17416 I 0.680
RPRC000264 Rhodnius prolixus RPRC000264 I 0.668
SBAD_0000431501 Soboliphyme baturini SBAD_0000431501 I 0.600
SCUD_0000585201 Schistosoma curassoni SCUD_0000585201 I 0.602
SINV15566 Solenopsis invicta SINV15566 I 0.668
six1.L Xenopus laevis XB-GENE-480721 I 0.724
six2.S Xenopus laevis XB-GENE-865135 I 0.724
SIX4 Canis familiaris ENSCAFG00000015627 I 0.669
SIX4 Choloepus hoffmanni ENSCHOG00000005951 I 0.636
SIX4 Callithrix jacchus ENSCJAG00000019133 I 0.669
SIX4 Dasypus novemcinctus ENSDNOG00000044446 I 0.669
SIX4 Equus caballus ENSECAG00000023515 I 0.669
SIX4 Homo sapiens ENSG00000100625 D 0.669
SIX4 Gallus gallus ENSGALG00000017389 I 0.669
SIX4 Loxodonta africana ENSLAFG00000021577 I 0.669
SIX4 Meleagris gallopavo ENSMGAG00000013569 I 0.669
SIX4 Microcebus murinus ENSMICG00000003524 I 0.669
SIX4 Monodelphis domestica ENSMODG00000008646 I 0.669
Six4 Mus musculus ENSMUSG00000034460 D 0.669
SIX4 Otolemur garnettii ENSOGAG00000016082 I 0.669
SIX4 Ochotona princeps ENSOPRG00000011678 I 0.669
SIX4 Procavia capensis ENSPCAG00000014927 I 0.669
SIX4 Pan troglodytes ENSPTRG00000006411 I 0.669
Six4 Rattus norvegicus ENSRNOG00000007250 I 0.669
SIX4 Sus scrofa ENSSSCG00000005089 I 0.669
Six4 Drosophila melanogaster FBgn0027364 D 0.668
six4 Xenopus tropicalis XB-GENE-481699 I 0.685
six45 Ciona intestinalis ENSCING00000004748 I 0.642
six4a Danio rerio ENSDARG00000004695 I 0.669
six4a Gasterosteus aculeatus ENSGACG00000008440 I 0.673
six4a Oryzias latipes ENSORLG00000015756 I 0.668
six4a Tetraodon nigroviridis ENSTNIG00000017344 I 0.668
six4a Takifugu rubripes ENSTRUG00000010704 I 0.668
six4b Danio rerio ENSDARG00000031983 I 0.669
SIX5 Bos taurus ENSBTAG00000013346 I 0.667
SIX5 Canis familiaris ENSCAFG00000004394 I 0.667
SIX5 Callithrix jacchus ENSCJAG00000012372 I 0.667
SIX5 Cavia porcellus ENSCPOG00000014282 I 0.667
six5 Danio rerio ENSDARG00000068406 I 0.681
SIX5 Dasypus novemcinctus ENSDNOG00000035763 I 0.667
SIX5 Equus caballus ENSECAG00000015419 I 0.667
SIX5 Felis catus ENSFCAG00000030970 I 0.667
SIX5 Homo sapiens ENSG00000177045 D 0.667
six5 Gasterosteus aculeatus ENSGACG00000009721 I 0.675
SIX5 Gorilla gorilla ENSGGOG00000007958 I 0.667
SIX5 Loxodonta africana ENSLAFG00000030935 I 0.667
SIX5 Myotis lucifugus ENSMLUG00000001318 I 0.667
Six5 Mus musculus ENSMUSG00000040841 I 0.667
SIX5 Otolemur garnettii ENSOGAG00000013460 I 0.667
six5 Oryzias latipes ENSORLG00000006762 I 0.681
SIX5 Procavia capensis ENSPCAG00000004939 I 0.667
SIX5 Pan troglodytes ENSPTRG00000033681 I 0.667
SIX5 Pteropus vampyrus ENSPVAG00000001347 I 0.667
Six5 Rattus norvegicus ENSRNOG00000060146 I 0.667
six5 Tetraodon nigroviridis ENSTNIG00000007742 I 0.680
six5 Takifugu rubripes ENSTRUG00000011163 I 0.680
SIX5 Tursiops truncatus ENSTTRG00000014303 I 0.667
six9 Oryzias latipes ENSORLG00000006757 I 0.632
SMAR005228 Strigamia maritima SMAR005228 I 0.655
Smp_039470 Schistosoma mansoni Smp_039470 I 0.617
SMRZ_0000838301 Schistosoma margrebowiei SMRZ_0000838301 I 0.630
SMRZ_0001033601 Schistosoma margrebowiei SMRZ_0001033601 I 0.602
SMTD_0001710001 Schistosoma mattheei SMTD_0001710001 I 0.602
SMU15013596 Schmidtea mediterranea SMU15013596 I 0.668
SNAPOd2T00025245001 Oikopleura dioica SNAPOd2T00025245001 I 0.608
SPAL_0000663500 Strongyloides papillosus SPAL_0000663500 I 0.634
SPU_017380 Strongylocentrotus purpuratus SPU_017380 I 0.661
SSTP_0000577700 Strongyloides stercoralis SSTP_0000577700 I 0.634
SVE_0935100 Strongyloides venezuelensis SVE_0935100 I 0.634
SVUK_0000475301 Strongylus vulgaris SVUK_0000475301 I 0.612
T265_04509 Opisthorchis viverrini T265_04509 I 0.628
TC003852 Tribolium castaneum TC003852 I 0.668
tetur06g00560 Tetranychus urticae tetur06g00560 I 0.641
TRE_0000254801 Trichobilharzia regenti TRE_0000254801 I 0.632
unc-39 Caenorhabditis elegans WBGene00006775 I 0.601