PK13537.1 (Cannabis sativa)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 PK13537.1 T230095_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.840 0.792
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.626 0.562
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.606 0.438
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.606 0.438
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.606 0.438
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.606 0.438
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK13537.1 Homeodomain 427 477

Links

Other Homeodomain family TFs
Other Cannabis sativa TFs

1013 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0019s00470 Populus trichocarpa POPTR_0019s00470 N 0.000
POPTR_0019s00540 Populus trichocarpa POPTR_0019s00540 N 0.000
POPTR_0019s03720 Populus trichocarpa POPTR_0019s03720 N 0.000
POPTR_0031s00230 Populus trichocarpa POPTR_0031s00230 N 0.000
POPTR_0031s00260 Populus trichocarpa POPTR_0031s00260 N 0.000
POPTR_0031s00430 Populus trichocarpa POPTR_0031s00430 N 0.000
SapurV1A.1086s0080 Salix purpurea SapurV1A.1086s0080 N 0.000