BGLB004491 (Biomphalaria glabrata)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 BGLB004491 T232410_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NOBOX
M09135_2.00 		Homo sapiens
HTAATTRVB
VBYAATTAD		 Misc
Kulakovskiy et al.(2013)
NOBOX_HUMAN.H11MO.0.C 		0.656 0.292
HESX1
M03187_2.00 		Homo sapiens
NHTAATTRVH
DBYAATTADN		 SELEX
Jolma et al.(2013)
HESX1_1 		0.650 0.236
HESX1
M03188_2.00 		Homo sapiens
NTAATTRGYAATTAD
HTAATTRCYAATTAN		 SELEX
Jolma et al.(2013)
HESX1_2 		0.650 0.236
HESX1
M05227_2.00 		Homo sapiens
DYAATTRV
BYAATTRH		 SELEX
Yin et al.(2017)
HESX1_FL_HT-SELEX 		0.650 0.236
HESX1
M05228_2.00 		Homo sapiens
NYAATTRD
HYAATTRN		 SELEX
Yin et al.(2017)
HESX1_FL_Methyl-HT-SELEX 		0.650 0.236
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGLB004491-PA Homeodomain 100 145
BGLB004491-PA Homeodomain 149 174

Links

Other Homeodomain family TFs
Other Biomphalaria glabrata TFs

125 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30170.m013679 Ricinus communis 30170.m013679 I 0.000
cassava22418.valid.m1 Manihot esculenta cassava22418.valid.m1 I 0.000
cassava8864.m1 Manihot esculenta cassava8864.m1 I 0.000
Ciclev10002805m.g Citrus clementina Ciclev10002805m.g I 0.000
Cla010123 Citrullus lanatus Cla010123 I 0.000
Cla022990 Citrullus lanatus Cla022990 I 0.000
Cucsa.353000 Cucumis sativus Cucsa.353000 I 0.000
Cucsa.395470 Cucumis sativus Cucsa.395470 I 0.000
gene02614-v1.0-hybrid Fragaria vesca gene02614-v1.0-hybrid I 0.000
Lus10018662.g Linum usitatissimum Lus10018662.g I 0.000
MDP0000140166 Malus domestica MDP0000140166 I 0.000
MDP0000200822 Malus domestica MDP0000200822 I 0.000
orange1.1g039918m.g Citrus sinensis orange1.1g039918m.g I 0.000
POPTR_0002s11660 Populus trichocarpa POPTR_0002s11660 I 0.000
POPTR_0014s01390 Populus trichocarpa POPTR_0014s01390 I 0.000
SapurV1A.0004s0180 Salix purpurea SapurV1A.0004s0180 I 0.000
SapurV1A.3851s0010 Salix purpurea SapurV1A.3851s0010 I 0.000