CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PTRK_0000043500
(
Parastrongyloides trichosuri
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
PTRK_0000043500
T235705_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTRK_0000043500.1
Homeodomain
192
254
RFHHLHEIPKLERWFKSDCNPSKHKLNTYLNELNNSHYRQRGHKITQTQLSNWFNSKRATQRN
PTRK_0000043500.1
Homeodomain
418
485
ARSRLMFDPLSELPVLEKWFEENPHPGWLQIERYTDYLNNAPYRANYPPVSTHNVKIWFKNRRAKCKR
Links
Other
Homeodomain
family TFs
Other
Parastrongyloides trichosuri
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L898_g34810
Steinernema monticolum
L898_g34810
N
0.673
SPAL_0000744000
Strongyloides papillosus
SPAL_0000744000
N
0.659
SSTP_0001191000
Strongyloides stercoralis
SSTP_0001191000
N
0.616
SVE_1021200
Strongyloides venezuelensis
SVE_1021200
N
0.659