CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMRZ_0001121101
(
Schistosoma margrebowiei
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
SMRZ_0001121101
T236094_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMRZ_0001121101-mRNA-1
Homeodomain
75
122
VPDIPALKMVFEKNHKPTYAQIKELSKTLNLSDRSIEAWFRKKRNCEK
Links
Other
Homeodomain
family TFs
Other
Schistosoma margrebowiei
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.0876s0043
Capsella grandiflora
Cagra.0876s0043
N
Cagra.5789s0001
Capsella grandiflora
Cagra.5789s0001
N
cassava15703.m1
Manihot esculenta
cassava15703.m1
N
cassava45648.m1
Manihot esculenta
cassava45648.m1
N
Ca_10215
Cicer arietinum
Ca_10215
N
chr1.CM0600.120.nd
Lotus japonicus
chr1.CM0600.120.nd
N
CM0385.220.nd
Lotus japonicus
CM0385.220.nd
N
Eucgr.B03766
Eucalyptus grandis
Eucgr.B03766
N
F775_42755
Aegilops tauschii
F775_42755
N
Gorai.008G086400
Gossypium raimondii
Gorai.008G086400
I
LjSGA_014958.1
Lotus japonicus
LjSGA_014958.1
N
LjSGA_034303.1
Lotus japonicus
LjSGA_034303.1
N
LjSGA_057038.1
Lotus japonicus
LjSGA_057038.1
N
LjSGA_057664.1
Lotus japonicus
LjSGA_057664.1
N
mgf018056m
Mimulus guttatus
mgf018056m
N
mgf023771m
Mimulus guttatus
mgf023771m
N
MLOC_39554
Hordeum vulgare
MLOC_39554
I
MTR_1g087540
Medicago truncatula
MTR_1g087540
N
OB06G28240
Oryza brachyantha
OB06G28240
N
ORGLA02G0219000
Oryza glaberrima
ORGLA02G0219000
N
Pavir.Db00878
Panicum virgatum
Pavir.Db00878
N
Pavir.Eb02286
Panicum virgatum
Pavir.Eb02286
N
Pavir.J14839
Panicum virgatum
Pavir.J14839
N
Pavir.J25377
Panicum virgatum
Pavir.J25377
N
PDK_20s1922781g001
Phoenix dactylifera
PDK_20s1922781g001
N
PK21717.1
Cannabis sativa
PK21717.1
N
Pm000007
Prunus mume
Pm000007
N
POPTR_0013s05310
Populus trichocarpa
POPTR_0013s05310
I
POPTR_0017s10780
Populus trichocarpa
POPTR_0017s10780
N
TCM_041010
Theobroma cacao
TCM_041010
I
Traes_7AS_ADDEF000C
Triticum aestivum
Traes_7AS_ADDEF000C
N
Traes_7AS_FD974A17F
Triticum aestivum
Traes_7AS_FD974A17F
N
Traes_7DS_76515C538
Triticum aestivum
Traes_7DS_76515C538
N