CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SROB_0001175701
(
Schistosoma rodhaini
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
SROB_0001175701
T236414_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SROB_0001175701-mRNA-1
Homeodomain
118
155
RSPRIPFSRDQIFRLERKFQNSKYLSGWEVKQLAXXXX
Links
Other
Homeodomain
family TFs
Other
Schistosoma rodhaini
TFs
51 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACEP10474
Atta cephalotes
ACEP10474
N
0.625
Afo_R006907
Aptenodytes forsteri
Afo_R006907
I
0.599
AFUN010407
Anopheles funestus
AFUN010407
N
0.609
AMAM003654
Anopheles maculatus
AMAM003654
I
0.608
AMIN005749
Anopheles minimus
AMIN005749
I
0.627
BGLB001559
Biomphalaria glabrata
BGLB001559
N
0.702
Cflo_11771--XP_392872.2_APIME
Camponotus floridanus
Cflo_11771--XP_392872.2_APIME
N
0.607
csin104516
Clonorchis sinensis
csin104516
N
0.745
D915_09342
Fasciola hepatica
D915_09342
N
0.677
DILT_0000804401
Diphyllobothrium latum
DILT_0000804401
N
0.632
DME_0000391201
Dracunculus medinensis
DME_0000391201
I
0.630
EFV59996
Trichinella spiralis
EFV59996
N
0.674
EFV60006
Trichinella spiralis
EFV60006
N
0.674
ENSMEUG00000001401
Macropus eugenii
ENSMEUG00000001401
N
0.613
ENSMICG00000002512
Microcebus murinus
ENSMICG00000002512
I
0.640
ENSPSIG00000008536
Pelodiscus sinensis
ENSPSIG00000008536
I
0.614
EVEC_0000238601
Enterobius vermicularis
EVEC_0000238601
I
0.600
GD19379
Drosophila simulans
FBgn0085026
N
0.688
GPLIN_000644800
Globodera pallida
GPLIN_000644800
I
0.603
HDID_0000158701
Hymenolepis diminuta
HDID_0000158701
N
0.640
L898_g16919
Steinernema monticolum
L898_g16919
N
0.600
LDEC001243
Leptinotarsa decemlineata
LDEC001243
I
0.617
MCINX001506
Melitaea cinxia
MCINX001506
I
0.623
MhA1_Contig1584.frz3.gene20
Meloidogyne hapla
MhA1_Contig1584.frz3.gene20
N
0.640
Obox7
Mus musculus
ENSMUSG00000055942
I
0.674
PHUM317730
Pediculus humanus
PHUM317730
N
0.699
PXEA_0001780701
Protopolystoma xenopodis
PXEA_0001780701
N
0.627
PXEA_0002877701
Protopolystoma xenopodis
PXEA_0002877701
N
0.641
SBAD_0000181501
Soboliphyme baturini
SBAD_0000181501
N
0.676
scaffold37-EXSNAP2012.8
Pristionchus exspectatus
scaffold37-EXSNAP2012.8
N
0.620
SCUD_0001462201
Schistosoma curassoni
SCUD_0001462201
N
0.693
SINV19440
Solenopsis invicta
SINV19440
N
0.658
Sjc_0039470
Schistosoma japonicum
Sjc_0039470
I
0.619
Smp_030050
Schistosoma mansoni
Smp_030050
N
0.723
SMRZ_0000101501
Schistosoma margrebowiei
SMRZ_0000101501
N
0.672
SMTD_0000532701
Schistosoma mattheei
SMTD_0000532701
N
0.672
SMTD_0000630101
Schistosoma mattheei
SMTD_0000630101
I
0.605
SMTD_0001176901
Schistosoma mattheei
SMTD_0001176901
N
0.693
SMU15032406
Schmidtea mediterranea
SMU15032406
N
0.619
SNAPOd2T00004995001
Oikopleura dioica
SNAPOd2T00004995001
N
0.607
SPER_0000113901
Spirometra erinaceieuropaei
SPER_0000113901
N
0.632
SPER_0000700401
Spirometra erinaceieuropaei
SPER_0000700401
N
0.632
SROB_0000847001
Schistosoma rodhaini
SROB_0000847001
N
0.625
SROB_0001170301
Schistosoma rodhaini
SROB_0001170301
I
0.612
T265_03375
Opisthorchis viverrini
T265_03375
N
0.712
TASK_0001026901
Taenia asiatica
TASK_0001026901
N
0.627
TCNE_0000805901
Toxocara canis
TCNE_0000805901
I
0.600
TRE_0001513201
Trichobilharzia regenti
TRE_0001513201
N
0.672
TsM_000433500
Taenia solium
TsM_000433500
N
0.600
TsM_000683500
Taenia solium
TsM_000683500
N
0.623
TsM_001091900
Taenia solium
TsM_001091900
N
0.611