GLYMA19G31940 (Glycine max)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 GLYMA19G31940 T240722_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSFB3
M06937_2.00 		Arabidopsis thaliana
RRAANMWTCTAGAAV
BTTCTAGAWKNTTYY		 Dap-seq
OMalley et al.(2016)
HSFB3_col_a 		0.476 0.782
HSFB3
M06938_2.00 		Arabidopsis thaliana
AABSTTCTAGAAN
NTTCTAGAASVTT		 Dap-seq
OMalley et al.(2016)
HSFB3_colamp_a 		0.476 0.782
HSFB2B
M06945_2.00 		Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSF7_col_a 		0.432 0.724
HSFB2B
M06946_2.00 		Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSF7_colamp_a 		0.432 0.724
HSFB4
M06936_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFB4_col_a 		0.430 0.701
HSFB2A
M00869_2.00 		Arabidopsis thaliana
NNNNNTTCB
VGAANNNNN		 PBM
Franco-Zorrilla et al.(2014)
HSFB2A 		0.419 0.701
HSFB2A
M06952_2.00 		Arabidopsis thaliana
GAANNTTCYAGA
TCTRGAANNTTC		 Dap-seq
OMalley et al.(2016)
HSF6_col_a 		0.419 0.701
HSFA4A
M06947_2.00 		Arabidopsis thaliana
NNNRGAABBTTCTAGAANN
NNTTCTAGAAVVTTCYNNN		 Dap-seq
OMalley et al.(2016)
HSF21_col_a 		0.390 0.586
HSFA1E
M06939_2.00 		Arabidopsis thaliana
RGAANNTTCTAGA
TCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSFA1E_col_a 		0.383 0.609
HSFA1E
M06940_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA1E_colamp_a 		0.383 0.609
HSFC1
M00868_2.00 		Arabidopsis thaliana
NDTCBNNN
NNNVGAHN		 PBM
Franco-Zorrilla et al.(2014)
HSFC1 		0.367 0.540
HSFC1
M06943_2.00 		Arabidopsis thaliana
GAASNTTCTAG
CTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFC1_col_a 		0.367 0.540
HSFC1
M06944_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAANVW
WBNTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFC1_colamp_a 		0.367 0.540
HSFA6A
M06950_2.00 		Arabidopsis thaliana
GAASNTTCTAGAANNW
WNNTTCTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFA6A_col_a 		0.367 0.598
HSFA6A
M06951_2.00 		Arabidopsis thaliana
GAASNTTCTAGAA
TTCTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFA6A_colamp_a 		0.367 0.598
HSFA1B
M06948_2.00 		Arabidopsis thaliana
GAANNTTCTAGA
TCTAGAANNTTC		 Dap-seq
OMalley et al.(2016)
HSF3_col_a 		0.363 0.598
HSFA1B
M06949_2.00 		Arabidopsis thaliana
TTCYRG
CYRGAA		 Dap-seq
OMalley et al.(2016)
HSF3_colamp_a 		0.363 0.598
HSFA6B
M06941_2.00 		Arabidopsis thaliana
RGAASNTTCTAGA
TCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_colamp_a 		0.341 0.609
HSFA6B
M06942_2.00 		Arabidopsis thaliana
RGAABNTTCTRGAAN
NTTCYAGAANVTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_col 		0.341 0.609
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA19G31940.2 HSF 21 111

Links

Other HSF family TFs
Other Glycine max TFs

1356 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00022p00252530 Amborella trichopoda AMTR_s00022p00252530 I
Aquca_014_00829 Aquilegia coerulea Aquca_014_00829 I
AtMYB32 Arabidopsis lyrata scaffold_700628.1 I
ATMYB46 Arabidopsis lyrata scaffold_601291.1 I
Bo2g010970 Brassica oleracea Bo2g010970 I
Bo3g008870 Brassica oleracea Bo3g008870 I
Bo5g009920 Brassica oleracea Bo5g009920 I
Bo5g139830 Brassica oleracea Bo5g139830 I
Bo9g169270 Brassica oleracea Bo9g169270 I
Bostr.22252s0219 Boechera stricta Bostr.22252s0219 I
Bostr.28625s0318 Boechera stricta Bostr.28625s0318 I
Bostr.2902s0023 Boechera stricta Bostr.2902s0023 I
Bra006166 Brassica rapa Bra006166 I
Bra008875 Brassica rapa Bra008875 I
Bra029696 Brassica rapa Bra029696 I
Cagra.0736s0026 Capsella grandiflora Cagra.0736s0026 I
Cagra.1535s0018 Capsella grandiflora Cagra.1535s0018 I
Cagra.2991s0041 Capsella grandiflora Cagra.2991s0041 I
Carubv10001573m.g Capsella rubella Carubv10001573m.g I
Carubv10014093m.g Capsella rubella Carubv10014093m.g I
Carubv10015767m.g Capsella rubella Carubv10015767m.g I
cassava30676.valid.m1 Manihot esculenta cassava30676.valid.m1 I
cassava32908.m1 Manihot esculenta cassava32908.m1 I
cassava39861.m1 Manihot esculenta cassava39861.m1 I
cassava5203.m1 Manihot esculenta cassava5203.m1 I
Ca_05777 Cicer arietinum Ca_05777 I
Ciclev10017658m.g Citrus clementina Ciclev10017658m.g I
Ciclev10033941m.g Citrus clementina Ciclev10033941m.g I
Cla003497 Citrullus lanatus Cla003497 I
Cla008683 Citrullus lanatus Cla008683 I
Cla017541 Citrullus lanatus Cla017541 I
Cucsa.065530 Cucumis sativus Cucsa.065530 I
Cucsa.127860 Cucumis sativus Cucsa.127860 I
Cucsa.195180 Cucumis sativus Cucsa.195180 I
Eucgr.B03684 Eucalyptus grandis Eucgr.B03684 I
Eucgr.G03385 Eucalyptus grandis Eucgr.G03385 I
Eucgr.H01337 Eucalyptus grandis Eucgr.H01337 I
evm.TU.supercontig_214.5 Carica papaya evm.TU.supercontig_214.5 I
evm.TU.supercontig_640.1 Carica papaya evm.TU.supercontig_640.1 I
evm.TU.supercontig_84.59 Carica papaya evm.TU.supercontig_84.59 I
gene14666-v1.0-hybrid Fragaria vesca gene14666-v1.0-hybrid I
gene27001-v1.0-hybrid Fragaria vesca gene27001-v1.0-hybrid I
GLYMA11G14200 Glycine max GLYMA11G14200 I
GLYMA12G06180 Glycine max GLYMA12G06180 I
GLYMA12G36630 Glycine max GLYMA12G36630 I
GLYMA13G07020 Glycine max GLYMA13G07020 I
GLYMA13G27310 Glycine max GLYMA13G27310 I
GLYMA13G41470 Glycine max GLYMA13G41470 I
GLYMA15G03920 Glycine max GLYMA15G03920 I
GLYMA19G05080 Glycine max GLYMA19G05080 I
Gorai.001G138800 Gossypium raimondii Gorai.001G138800 I
Gorai.004G037300 Gossypium raimondii Gorai.004G037300 I
Gorai.004G172700 Gossypium raimondii Gorai.004G172700 I
Gorai.006G129100 Gossypium raimondii Gorai.006G129100 I
Gorai.007G011100 Gossypium raimondii Gorai.007G011100 I
Gorai.013G251100 Gossypium raimondii Gorai.013G251100 I
GSMUA_Achr2G07780_001 Musa acuminata GSMUA_Achr2G07780_001 I
GSMUA_Achr6G35800_001 Musa acuminata GSMUA_Achr6G35800_001 I
GSMUA_Achr8G31350_001 Musa acuminata GSMUA_Achr8G31350_001 I
GSMUA_AchrUn_randomG21080_001 Musa acuminata GSMUA_AchrUn_randomG21080_001 I
LjSGA_026563.1 Lotus japonicus LjSGA_026563.1 I
LjSGA_115006.1 Lotus japonicus LjSGA_115006.1 I
Lus10002559.g Linum usitatissimum Lus10002559.g I
Lus10016413.g Linum usitatissimum Lus10016413.g I
Lus10027369.g Linum usitatissimum Lus10027369.g I
Lus10029520.g Linum usitatissimum Lus10029520.g I
Lus10031281.g Linum usitatissimum Lus10031281.g I
Lus10031850.g Linum usitatissimum Lus10031850.g I
Lus10039610.g Linum usitatissimum Lus10039610.g I
MDP0000204495 Malus domestica MDP0000204495 I
MDP0000722954 Malus domestica MDP0000722954 I
MDP0000736994 Malus domestica MDP0000736994 I
mgf024753m Mimulus guttatus mgf024753m I
MTR_2g097910 Medicago truncatula MTR_2g097910 I
MTR_3g028740 Medicago truncatula MTR_3g028740 I
MTR_4g065017 Medicago truncatula MTR_4g065017 I
MYB26 Arabidopsis thaliana AT3G13890 I
MYB26 Arabidopsis lyrata fgenesh2_kg.3__1496__AT3G13890.1 I
MYB26 Vitis vinifera VIT_09s0002g01670 I
MYB46 Arabidopsis thaliana AT5G12870 D
MYB83 Arabidopsis thaliana AT3G08500 D
MYB83 Arabidopsis lyrata fgenesh2_kg.3__848__AT3G08500.1 I
orange1.1g019619m.g Citrus sinensis orange1.1g019619m.g I
orange1.1g021164m.g Citrus sinensis orange1.1g021164m.g I
PDK_20s1844641g001 Phoenix dactylifera PDK_20s1844641g001 I
PGSC0003DMG400006868 Solanum tuberosum PGSC0003DMG400006868 I
PGSC0003DMG400007360 Solanum tuberosum PGSC0003DMG400007360 I
PK13930.1 Cannabis sativa PK13930.1 I
PK14287.1 Cannabis sativa PK14287.1 I
Pm012272 Prunus mume Pm012272 I
Pm016295 Prunus mume Pm016295 I
POPTR_0001s26590 Populus trichocarpa POPTR_0001s26590 I
POPTR_0001s27430 Populus trichocarpa POPTR_0001s27430 I
POPTR_0009s05860 Populus trichocarpa POPTR_0009s05860 I
POPTR_0009s06630 Populus trichocarpa POPTR_0009s06630 I
PRUPE_ppa009566mg Prunus persica PRUPE_ppa009566mg I
PRUPE_ppa016923mg Prunus persica PRUPE_ppa016923mg I
SapurV1A.0027s0350 Salix purpurea SapurV1A.0027s0350 I
SapurV1A.0102s0340 Salix purpurea SapurV1A.0102s0340 I
SapurV1A.0390s0200 Salix purpurea SapurV1A.0390s0200 I
SapurV1A.0534s0230 Salix purpurea SapurV1A.0534s0230 I
SapurV1A.0925s0070 Salix purpurea SapurV1A.0925s0070 I
SapurV1A.1730s0020 Salix purpurea SapurV1A.1730s0020 I
Solyc01g087130.2 Solanum lycopersicum Solyc01g087130.2 I
Solyc08g081500.1 Solanum lycopersicum Solyc08g081500.1 I
Solyc11g065840.1 Solanum lycopersicum Solyc11g065840.1 I
TCM_005885 Theobroma cacao TCM_005885 I
Thhalv10015560m.g Eutrema salsugineum Thhalv10015560m.g I
Thhalv10021052m.g Eutrema salsugineum Thhalv10021052m.g I
Thhalv10028778m.g Eutrema salsugineum Thhalv10028778m.g I
VIT_06s0004g02110 Vitis vinifera VIT_06s0004g02110 I