CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

GRMZM2G118453 *(Zea mays)* HSF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00447 (HSF_DNA-bind)	IPR000232	GRMZM2G118453	T240753_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
HSFA4A M06947_2.00	Arabidopsis thaliana	NNNRGAABBTTCTAGAANN	NNTTCTAGAAVVTTCYNNN	Dap-seq OMalley et al.(2016) HSF21_col_a	0.460	0.736
HSFA1E M06939_2.00	Arabidopsis thaliana	RGAANNTTCTAGA	TCTAGAANNTTCY	Dap-seq OMalley et al.(2016) HSFA1E_col_a	0.400	0.690
HSFA1E M06940_2.00	Arabidopsis thaliana	RGAASNTTCTAGAAN	NTTCTAGAANSTTCY	Dap-seq OMalley et al.(2016) HSFA1E_colamp_a	0.400	0.690
HSFB4 M06936_2.00	Arabidopsis thaliana	RGAASNTTCTAGAAN	NTTCTAGAANSTTCY	Dap-seq OMalley et al.(2016) HSFB4_col_a	0.379	0.678
HSFA1B M06948_2.00	Arabidopsis thaliana	GAANNTTCTAGA	TCTAGAANNTTC	Dap-seq OMalley et al.(2016) HSF3_col_a	0.377	0.667
HSFA1B M06949_2.00	Arabidopsis thaliana	TTCYRG	CYRGAA	Dap-seq OMalley et al.(2016) HSF3_colamp_a	0.377	0.667
HSFB2B M06945_2.00	Arabidopsis thaliana	RGAANNTTCTAGAA	TTCTAGAANNTTCY	Dap-seq OMalley et al.(2016) HSF7_col_a	0.371	0.632
HSFB2B M06946_2.00	Arabidopsis thaliana	RGAANNTTCTAGAA	TTCTAGAANNTTCY	Dap-seq OMalley et al.(2016) HSF7_colamp_a	0.371	0.632
HSFC1 M00868_2.00	Arabidopsis thaliana	NDTCBNNN	NNNVGAHN	PBM Franco-Zorrilla et al.(2014) HSFC1	0.367	0.609
HSFC1 M06943_2.00	Arabidopsis thaliana	GAASNTTCTAG	CTAGAANSTTC	Dap-seq OMalley et al.(2016) HSFC1_col_a	0.367	0.609
HSFC1 M06944_2.00	Arabidopsis thaliana	RGAASNTTCTAGAANVW	WBNTTCTAGAANSTTCY	Dap-seq OMalley et al.(2016) HSFC1_colamp_a	0.367	0.609
HSFA6B M06941_2.00	Arabidopsis thaliana	RGAASNTTCTAGA	TCTAGAANSTTCY	Dap-seq OMalley et al.(2016) HSFA6B_colamp_a	0.364	0.609
HSFA6B M06942_2.00	Arabidopsis thaliana	RGAABNTTCTRGAAN	NTTCYAGAANVTTCY	Dap-seq OMalley et al.(2016) HSFA6B_col	0.364	0.609
HSFB2A M00869_2.00	Arabidopsis thaliana	NNNNNTTCB	VGAANNNNN	PBM Franco-Zorrilla et al.(2014) HSFB2A	0.357	0.609
HSFB2A M06952_2.00	Arabidopsis thaliana	GAANNTTCYAGA	TCTRGAANNTTC	Dap-seq OMalley et al.(2016) HSF6_col_a	0.357	0.609
HSFA6A M06950_2.00	Arabidopsis thaliana	GAASNTTCTAGAANNW	WNNTTCTAGAANSTTC	Dap-seq OMalley et al.(2016) HSFA6A_col_a	0.351	0.598
HSFA6A M06951_2.00	Arabidopsis thaliana	GAASNTTCTAGAA	TTCTAGAANSTTC	Dap-seq OMalley et al.(2016) HSFA6A_colamp_a	0.351	0.598
HSFB3 M06937_2.00	Arabidopsis thaliana	RRAANMWTCTAGAAV	BTTCTAGAWKNTTYY	Dap-seq OMalley et al.(2016) HSFB3_col_a	0.345	0.598
HSFB3 M06938_2.00	Arabidopsis thaliana	AABSTTCTAGAAN	NTTCTAGAASVTT	Dap-seq OMalley et al.(2016) HSFB3_colamp_a	0.345	0.598
For this family, TFs with SR scores > 0.318* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
GRMZM2G118453_P01	HSF	10	100	FLSKTYEMVDDPATDAVVAWTPLGTSFVVANQAEFCRDLLPKYFKHNNFSSFVRQLNTYGFKKIDPEQWEFANDDFIRGQQHRLKNIHRRK

Links
Other HSF family TFs
Other *Zea mays* TFs

1399 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
BGIOSGA009295	Oryza indica	BGIOSGA009295	N
F775_10178	Aegilops tauschii	F775_10178	N
MLOC_51817	Hordeum vulgare	MLOC_51817	N
OBART02G37310	Oryza barthii	OBART02G37310	N
OGLUM02G38450	Oryza glumaepatula	OGLUM02G38450	N
OLONG_013731	Oryza longistaminata	OLONG_013731	N
OMERI02G35090	Oryza meridionalis	OMERI02G35090	N
ONIVA02G40070	Oryza nivara	ONIVA02G40070	N
OPUNC02G34470	Oryza punctata	OPUNC02G34470	N
ORGLA02G0325300	Oryza glaberrima	ORGLA02G0325300	N
ORUFI02G38810	Oryza rufipogon	ORUFI02G38810	N
Pavir.Ab03236	Panicum virgatum	Pavir.Ab03236	N
Traes_6AL_6E9EB1143	Triticum aestivum	Traes_6AL_6E9EB1143	N
Traes_6BL_70715AAF9	Triticum aestivum	Traes_6BL_70715AAF9	N
Traes_6DL_917D35DED	Triticum aestivum	Traes_6DL_917D35DED	N
TRIUR3_25071	Triticum urartu	TRIUR3_25071	N

GRMZM2G118453 (Zea mays) HSF

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

1399 Related TFs

GRMZM2G118453 **(Zea mays)
HSF**