CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Aa01928
(
Panicum virgatum
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00447 (HSF_DNA-bind)
IPR000232
Pavir.Aa01928
T243315_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Aa01928.1.p
HSF
79
169
FLSKTYDLVSEPALDGVISWGAAGNSFVVWDPSTFARDVLPHNFKHNNFSSFVRQLNTYGFRKVHADRWEFAHEDFLRHSKHLLKRIVRRR
Pavir.Aa01928.1.p
HSF
219
307
EQMSTLNHRLESAEDRQKQMVSFLAKLLQNPSFVRQLKLYREQKEIDSIRVKRKFLKHVPHSSIESGESSSQHGGESGSQFPVSSPMDT
Links
Other
HSF
family TFs
Other
Panicum virgatum
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AtMYB47
Arabidopsis thaliana
AT1G18710
N
AtMYB47
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_1001691
N
Bo5g025730
Brassica oleracea
Bo5g025730
N
Bo6g087030
Brassica oleracea
Bo6g087030
N
Bo6g118710
Brassica oleracea
Bo6g118710
N
Bo6g118730
Brassica oleracea
Bo6g118730
N
Bostr.3288s0088
Boechera stricta
Bostr.3288s0088
N
Bostr.7128s0480
Boechera stricta
Bostr.7128s0480
N
Bra003801
Brassica rapa
Bra003801
N
Bra015911
Brassica rapa
Bra015911
N
Bra015912
Brassica rapa
Bra015912
N
Bra025678
Brassica rapa
Bra025678
N
Carubv10014503m.g
Capsella rubella
Carubv10014503m.g
N
MYB95
Arabidopsis thaliana
AT1G74430
N
MYB95
Arabidopsis lyrata
fgenesh2_kg.2__1707__AT1G74430.1
N
Thhalv10018987m.g
Eutrema salsugineum
Thhalv10018987m.g
N