Pavir.Aa01928 (Panicum virgatum)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00447 (HSF_DNA-bind) IPR000232 Pavir.Aa01928 T243315_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Aa01928.1.p HSF 79 169
Pavir.Aa01928.1.p HSF 219 307

Links

Other HSF family TFs
Other Panicum virgatum TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LPERR02G15050 Leersia perrieri LPERR02G15050 I 0.372
OPUNC02G16840 Oryza punctata OPUNC02G16840 I 0.372
GRMZM2G059851 Zea mays GRMZM2G059851 I 0.366
Sb04g021490 Sorghum bicolor Sb04g021490 I 0.366
Si016943m.g Setaria italica Si016943m.g I 0.366
Pavir.Ab01320 Panicum virgatum Pavir.Ab01320 I 0.365
BGIOSGA006348 Oryza indica BGIOSGA006348 I 0.364
OBART02G18800 Oryza barthii OBART02G18800 I 0.364
OGLUM02G19090 Oryza glumaepatula OGLUM02G19090 I 0.364
OMERI02G18820 Oryza meridionalis OMERI02G18820 I 0.364
ONIVA02G20850 Oryza nivara ONIVA02G20850 I 0.364
ORGLA02G0162000 Oryza glaberrima ORGLA02G0162000 I 0.364
ORUFI02G19790 Oryza rufipogon ORUFI02G19790 I 0.364
HSFA3 Oryza sativa OS02G0527300 I 0.364
BRADI3G44700 Brachypodium distachyon BRADI3G44700 I 0.357
F775_04438 Aegilops tauschii F775_04438 I 0.356
MLOC_69675 Hordeum vulgare MLOC_69675 I 0.356
Traes_2AS_53BFA14C7 Triticum aestivum Traes_2AS_53BFA14C7 I 0.345
Traes_2BS_1484A7516 Triticum aestivum Traes_2BS_1484A7516 I 0.345
POPTR_0006s11680 Populus trichocarpa POPTR_0006s11680 I 0.325
Aquca_009_00974 Aquilegia coerulea Aquca_009_00974 I 0.323