CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Irf9
(
Rattus norvegicus
)
IRF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00605 (IRF)
IPR001346
ENSRNOG00000019478
T244370_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Irf9
M00173_2.00
Mus musculus
NNNRAAANN
NNTTTYNNN
PBM
Badis et al.(2009)
Isgf3g_2853
0.971
0.971
Irf9
M09240_2.00
Mus musculus
GAAABHGAAAYT
ARTTTCDVTTTC
Misc
Kulakovskiy et al.(2013)
IRF9_MOUSE.H11MO.0.C
0.971
0.971
IRF9
M02257_2.00
Ochotona princeps
DNYRAAAVND
HNBTTTYRNH
PBM
Weirauch et al.(2014)
pTH9337
0.837
0.837
IRF9
M02258_2.00
Sus scrofa
WNYGAAASY
RSTTTCRNW
PBM
Weirauch et al.(2014)
pTH9287
0.837
0.837
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000026364
IRF
11
115
KLRNWIVEQVESGQFPGVCWDDAAKTMFRIPWKHAGKQDFREDQDAAIFKAWALFKEKHKDGDIGNPAVWKTRLRCALNKSSEFEEVPERGRMDVAEPYKVYRIL
Links
Other
IRF
family TFs
Other
Rattus norvegicus
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASIM_0001284101
Anisakis simplex
ASIM_0001284101
N
0.000
CBN00923
Caenorhabditis brenneri
CBN00923
N
0.000
CRE17146
Caenorhabditis remanei
CRE17146
N
0.000
dve-1
Caenorhabditis elegans
WBGene00022861
N
0.000
L596_g9224
Steinernema carpocapsae
L596_g9224
N
0.000
L889_g25145
Steinernema feltiae
L889_g25145
N
0.000
L892_g9710
Steinernema scapterisci
L892_g9710
N
0.000
SMUV_0000944701
Syphacia muris
SMUV_0000944701
N
0.000
TCNE_0001573901
Toxocara canis
TCNE_0001573901
N
0.000