CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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F775_25468
(
Aegilops tauschii
)
Leafy
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01698 (FLO_LFY)
IPR002910
F775_25468
T244698_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
LFY
M02692_2.00
Arabidopsis thaliana
YWTKRACCRSYGGTYMAWR
YWTKRACCRSYGGTYMAWR
SELEX
Mathelier et al.(2014)
MA0590.1
0.765
0.765
LFY
M10895_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$LFY_Q2
0.765
0.765
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMT27095
Leafy
15
129
CRVAGLPCHVTNQVFRYASKVGASYINKPKMRHYVHCYALHCLDEDASDALRRAYKARGENVGAWRQACYAPLVDIAARHGFDIDAVFAAHPRLAIWYVPTRLRQLCHQARSAHD
Links
Other
Leafy
family TFs
Other
Aegilops tauschii
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo2g161690
Brassica oleracea
Bo2g161690
I
0.774
Bo3g109270
Brassica oleracea
Bo3g109270
I
0.765
Bra029305
Brassica rapa
Bra029305
I
0.774
cassava40548.m1
Manihot esculenta
cassava40548.m1
I
0.783
Cucsa.156880
Cucumis sativus
Cucsa.156880
I
0.739
FL
Populus trichocarpa
POPTR_0015s11820
I
0.757
Gorai.001G053900
Gossypium raimondii
Gorai.001G053900
I
0.774
LFY
Vitis vinifera
VIT_17s0000g00150
I
0.783
Lus10016732.g
Linum usitatissimum
Lus10016732.g
I
0.739
Lus10022427.g
Linum usitatissimum
Lus10022427.g
I
0.730
Pavir.Gb00795
Panicum virgatum
Pavir.Gb00795
I
0.843
PGSC0003DMG400014174
Solanum tuberosum
PGSC0003DMG400014174
I
0.824