CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf013601m
(
Mimulus guttatus
)
Leafy
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01698 (FLO_LFY)
IPR002910
mgf013601m
T244776_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
LFY
M02692_2.00
Arabidopsis thaliana
YWTKRACCRSYGGTYMAWR
YWTKRACCRSYGGTYMAWR
SELEX
Mathelier et al.(2014)
MA0590.1
0.887
0.887
LFY
M10895_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$LFY_Q2
0.887
0.887
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf013601m
Leafy
1
388
MDPDAFSASLFKWDPRGAMPPTNRLLEAVLPPPPPPPSSAYSVRPRELGGLEELFQAYGIRYYTAAKIAELGFTVNTLLDMRDEELEEMMNSLCQIFRWDLLVGERYGIKAAVRAERRRLDDEEARRRHLLCGDATTHHALDALSQEGLSEEPVQQQEKEAAGSGGGGVWEMVVAAGGRKQQRRRKNCRGRSRMAASMDDDDDDDDDETEGAEDDENCGGGGGGGGSERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKERGEKCPTKVTNQVFRYAKKAGANYINKPKMRHYVHCYALHCLDEDTSNALRRAFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNAHPRLSIWYVPTKLRQLCHAERSCAA
Links
Other
Leafy
family TFs
Other
Mimulus guttatus
TFs
68 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSDNOG00000014500
Dasypus novemcinctus
ENSDNOG00000014500
I
0.000
ENSFCAG00000001436
Felis catus
ENSFCAG00000001436
I
0.000
ENSMPUG00000010629
Mustela putorius furo
ENSMPUG00000010629
I
0.000
PRDM14
Canis familiaris
ENSCAFG00000007696
I
0.000