gene30750-v1.0-hybrid (Fragaria vesca)
Leafy

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01698 (FLO_LFY) IPR002910 gene30750-v1.0-hybrid T244788_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LFY
M02692_2.00 		Arabidopsis thaliana
YWTKRACCRSYGGTYMAWR
YWTKRACCRSYGGTYMAWR		 SELEX
Mathelier et al.(2014)
MA0590.1 		0.738 0.738
LFY
M10895_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$LFY_Q2 		0.738 0.738
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna30750.1-v1.0-hybrid Leafy 1 364

Links

Other Leafy family TFs
Other Fragaria vesca TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
16375_YML007W Saccharomyces mikatae 16375_YML007W I
17363_Multiple Saccharomyces paradoxus 17363_Multiple I
17789_YML007W Saccharomyces bayanus 17789_YML007W I
5144_YDR423C Saccharomyces mikatae 5144_YDR423C I
5680_YDR423C Saccharomyces paradoxus 5680_YDR423C I
AACERI_AaceriADR195C Saccharomycetaceae sp ashbya aceri AACERI_AaceriADR195C I
AGOS_ADR195C Ashbya gossypii AGOS_ADR195C I
CAD1 Saccharomyces cerevisiae YDR423C D
CAGL0F03069g Candida glabrata CAGL0F03069g I
Ecym_4064 Eremothecium cymbalariae Ecym_4064 I
KAFR_0C05400 Kazachstania africana KAFR_0C05400 I
KLLA0_A01760g Kluyveromyces lactis KLLA0_A01760g I
KLTH0G03784g Lachancea thermotolerans KLTH0G03784g I
KLTH0G03784g Kluyveromyces thermotolerans KLTH0G03784g I
KNAG_0B03680 Kazachstania naganishii KNAG_0B03680 I
Kpol_1023p97 Vanderwaltozyma polyspora Kpol_1023p97 I
KUCA_T00000686001 Kuraishia capsulata KUCA_T00000686001 I
Kwal_18631 Kluyveromyces waltii Kwal_18631 I
LALA0_S17e00166g Lachancea lanzarotensis LALA0_S17e00166g I
NCAS_0H02560 Naumovozyma castellii NCAS_0H02560 I
NDAI_0C01060 Naumovozyma dairenensis NDAI_0C01060 I
PAS_chr4_0601 Komagataella pastoris PAS_chr4_0601 I
SAKL0G04950g Lachancea kluyveri SAKL0G04950g I
Scas_Contig714.56 Saccharomyces castellii Scas_Contig714.56 I
SKUD_204302 Saccharomyces kudriavzevii SKUD_204302 I
SU7_2487 Saccharomyces arboricola SU7_2487 I
TBLA_0G00930 Tetrapisispora blattae TBLA_0G00930 I
TDEL_0A03920 Torulaspora delbrueckii TDEL_0A03920 I
XP_002494040.1 Pichia pastoris XP_002494040.1 I
YAP1 Saccharomyces cerevisiae YML007W D
ZBAI_03740 Zygosaccharomyces bailii ZBAI_03740 I
ZBAI_09424 Zygosaccharomyces bailii ZBAI_09424 I
ZYRO0D12584g Zygosaccharomyces rouxii ZYRO0D12584g I