Gorai.001G053900 (Gossypium raimondii)
Leafy

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01698 (FLO_LFY) IPR002910 Gorai.001G053900 T244790_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LFY
M02692_2.00 		Arabidopsis thaliana
YWTKRACCRSYGGTYMAWR
YWTKRACCRSYGGTYMAWR		 SELEX
Mathelier et al.(2014)
MA0590.1 		0.899 0.899
LFY
M10895_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$LFY_Q2 		0.899 0.899
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.001G053900.1 Leafy 1 388
Gorai.001G053900.2 Leafy 1 385

Links

Other Leafy family TFs
Other Gossypium raimondii TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_67224 Agaricus bisporus AGABI2DRAFT_67224 N 0.000
CERSUDRAFT_80391 Ceriporiopsis subvermispora CERSUDRAFT_80391 N 0.000
CNG03860 Cryptococcus neoformans CNG03860 N 0.000
CY34DRAFT_797726 Suillus luteus CY34DRAFT_797726 N 0.000
DACRYDRAFT_45478 Dacryopinax sp DACRYDRAFT_45478 N 0.000
DICSQDRAFT_106324 Dichomitus squalens DICSQDRAFT_106324 N 0.000
estExt_Genewise1.C_40657 Heterobasidion annosum estExt_Genewise1.C_40657 N 0.000
FOMPIDRAFT_149991 Fomitopsis pinicola FOMPIDRAFT_149991 N 0.000
GLOTRDRAFT_55410 Gloeophyllum trabeum GLOTRDRAFT_55410 N 0.000
gw1.2.905.1 Tremella mesenterica gw1.2.905.1 N 0.000
HETIRDRAFT_381259 Heterobasidion irregulare HETIRDRAFT_381259 N 0.000
JAAARDRAFT_28196 Jaapia argillacea JAAARDRAFT_28196 N 0.000
K443DRAFT_88544 Laccaria amethystina K443DRAFT_88544 N 0.000
L804_03480 Cryptococcus gattii L804_03480 N 0.000
LACBIDRAFT_311840 Laccaria bicolor LACBIDRAFT_311840 N 0.000
M378DRAFT_72501 Amanita muscaria M378DRAFT_72501 N 0.000
M404DRAFT_19687 Pisolithus tinctorius M404DRAFT_19687 N 0.000
M413DRAFT_441197 Hebeloma cylindrosporum M413DRAFT_441197 N 0.000
Moror_7396 Moniliophthora roreri Moror_7396 N 0.000
PAXRUDRAFT_826859 Paxillus rubicundulus PAXRUDRAFT_826859 N 0.000
PHACADRAFT_250787 Phanerochaete carnosa PHACADRAFT_250787 N 0.000
PHLGIDRAFT_22320 Phlebiopsis gigantea PHLGIDRAFT_22320 N 0.000
PILCRDRAFT_811342 Piloderma croceum PILCRDRAFT_811342 N 0.000
PISMIDRAFT_639669 Pisolithus microcarpus PISMIDRAFT_639669 N 0.000
PLEOSDRAFT_1039663 Pleurotus ostreatus PLEOSDRAFT_1039663 N 0.000
SCLCIDRAFT_1210097 Scleroderma citrinum SCLCIDRAFT_1210097 N 0.000
SERLA73DRAFT_104045 Serpula lacrymans SERLA73DRAFT_104045 N 0.000