Pavir.Ga00621 (Panicum virgatum)
Leafy

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01698 (FLO_LFY) IPR002910 Pavir.Ga00621 T244797_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LFY
M02692_2.00 		Arabidopsis thaliana
YWTKRACCRSYGGTYMAWR
YWTKRACCRSYGGTYMAWR		 SELEX
Mathelier et al.(2014)
MA0590.1 		0.827 0.827
LFY
M10895_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$LFY_Q2 		0.827 0.827
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ga00621.1.p Leafy 1 376

Links

Other Leafy family TFs
Other Panicum virgatum TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANIA_06293 Aspergillus nidulans CADANIAG00010534 N 0.000
aod-2 Neurospora crassa NCU03352 D 0.000
AUEXF2481DRAFT_349637 Aureobasidium subglaciale AUEXF2481DRAFT_349637 N 0.000
BAUCODRAFT_130166 Baudoinia compniacensis BAUCODRAFT_130166 N 0.000
BBA_09512 Beauveria bassiana BBA_09512 N 0.000
Bcin14g05090 Botrytis cinerea Bcin14g05090 N 0.000
CCM_08978 Cordyceps militaris CCM_08978 I 0.000
CIMG_05220 Coccidioides immitis CIMG_05220 N 0.000
COCC4DRAFT_195032 Bipolaris maydis COCC4DRAFT_195032 I 0.000
COCCADRAFT_100608 Bipolaris zeicola COCCADRAFT_100608 I 0.000
COCMIDRAFT_2843 Bipolaris oryzae COCMIDRAFT_2843 I 0.000
COCSADRAFT_26363 Bipolaris sorokiniana COCSADRAFT_26363 I 0.000
COCVIDRAFT_23515 Bipolaris victoriae COCVIDRAFT_23515 I 0.000
CPC735_064880 Coccidioides posadasii CPC735_064880 N 0.000
DOTSEDRAFT_66782 Dothistroma septosporum DOTSEDRAFT_66782 N 0.000
estExt_Genewise1Plus.C_20247 Mycosphaerella fijiensis estExt_Genewise1Plus.C_20247 N 0.000
estExt_Genewise1Plus.C_20430 Cryphonectria parasitica estExt_Genewise1Plus.C_20430 N 0.000
estExt_Genewise1Plus.C_chr_130174 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_130174 N 0.000
estExt_Genewise1Plus.C_sca_8_chr1_1_00440 Nectria haematococca estExt_Genewise1Plus.C_sca_8_chr1_1_00440 I 0.000
EURHEDRAFT_513555 Aspergillus ruber EURHEDRAFT_513555 N 0.000
e_gw1.9.140.1 Cochliobolus heterostrophus C5 e_gw1.9.140.1 I 0.000
fgeneshPB_pg.14__231 Phycomyces blakesleeanus fgeneshPB_pg.14__231 N 0.000
FGRRES_01562 Fusarium graminearum FGRRES_01562 I 0.000
FOXG_11146 Fusarium oxysporum FOXG_11146 I 0.000
GGTG_11194 Gaeumannomyces graminis GGTG_11194 I 0.000
GMDG_02970 Pseudogymnoascus destructans GMDG_02970 N 0.000
K437DRAFT_291790 Tilletiaria anomala K437DRAFT_291790 N 0.000
M422DRAFT_215363 Sphaerobolus stellatus M422DRAFT_215363 N 0.000
M422DRAFT_232009 Sphaerobolus stellatus M422DRAFT_232009 N 0.000
M437DRAFT_14214 Aureobasidium melanogenum M437DRAFT_14214 N 0.000
M438DRAFT_275275 Aureobasidium pullulans M438DRAFT_275275 N 0.000
MAJ_06041 Metarhizium majus MAJ_06041 I 0.000
MAPG_00750 Magnaporthe poae MAPG_00750 I 0.000
MBR_06803 Metarhizium brunneum MBR_06803 I 0.000
MGU_04562 Metarhizium guizhouense MGU_04562 I 0.000
MYCFIDRAFT_56164 Pseudocercospora fijiensis MYCFIDRAFT_56164 N 0.000
Mycgr3G77753 Zymoseptoria tritici Mycgr3G77753 N 0.000
NechaG65166 Fusarium solani NechaG65166 I 0.000
OCS_05478 Ophiocordyceps sinensis OCS_05478 I 0.000
OIDMADRAFT_194965 Oidiodendron maius OIDMADRAFT_194965 I 0.000
PODANS_3_6340 Podospora anserina PODANS_3_6340 I 0.000
PTT_07331 Pyrenophora teres PTT_07331 I 0.000
PV04_07332 Capronia semiimmersa PV04_07332 N 0.000
PV05_10153 Exophiala xenobiotica PV05_10153 N 0.000
PV06_09439 Exophiala oligosperma PV06_09439 N 0.000
PV07_11052 Cladophialophora immunda PV07_11052 N 0.000
PV10_03194 Exophiala mesophila PV10_03194 N 0.000
PV11_09075 Exophiala sideris PV11_09075 N 0.000
RO3G_02623 Rhizopus oryzae RO3G_02623 N 0.000
SEPMUDRAFT_145522 Sphaerulina musiva SEPMUDRAFT_145522 N 0.000
SETTUDRAFT_166610 Setosphaeria turcica SETTUDRAFT_166610 I 0.000
SNOG_07781 Stagonospora nodorum SNOG_07781 I 0.000
SPPG_00605 Spizellomyces punctatus SPPG_00605 N 0.000
THITE_2156602 Thielavia terrestris THITE_2156602 I 0.000
TRIREDRAFT_78799 Trichoderma reesei TRIREDRAFT_78799 I 0.000
TRIVIDRAFT_163283 Trichoderma virens TRIVIDRAFT_163283 N 0.000
V499_05991 Pseudogymnoascus pannorum V499_05991 N 0.000
VHEMI05725 Torrubiella hemipterigena VHEMI05725 I 0.000
X797_000023 Metarhizium robertsii X797_000023 I 0.000