CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PK10917.1
(
Cannabis sativa
)
Leafy
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01698 (FLO_LFY)
IPR002910
PK10917.1
T244802_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
LFY
M02692_2.00
Arabidopsis thaliana
YWTKRACCRSYGGTYMAWR
YWTKRACCRSYGGTYMAWR
SELEX
Mathelier et al.(2014)
MA0590.1
0.800
0.800
LFY
M10895_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$LFY_Q2
0.800
0.800
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK10917.1
Leafy
3
99
NDAADQEEDDDEYDEDDDDNTNVVFGKGSGRSNSCSSDQIRITCERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCRDFLFQVQSIAKERGDKCP
Links
Other
Leafy
family TFs
Other
Cannabis sativa
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
KLLA0_D07029g
Kluyveromyces lactis
KLLA0_D07029g
N
PHSY_003456
Pseudozyma hubeiensis
PHSY_003456
N
PSEUBRA_SCAF12g01696
Pseudozyma brasiliensis
PSEUBRA_SCAF12g01696
N
UM04999
Ustilago maydis
UM04999
N