LBD24 (Arabidopsis thaliana)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 AT3G26660 T244891_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD23
M06964_2.00 		Arabidopsis thaliana
NGCGNDRAWNNCGCN
NGCGNNWTYHNCGCN		 Dap-seq
OMalley et al.(2016)
LBD23_col_a 		1.000 1.000
LBD23
M06965_2.00 		Arabidopsis thaliana
DGCGDDRRWNNCGCN
NGCGNNWYYHHCGCH		 Dap-seq
OMalley et al.(2016)
LBD23_colamp_a 		1.000 1.000
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT3G26660.1 LOB 5 103

Links

Other LOB family TFs
Other Arabidopsis thaliana TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_024280 Acremonium chrysogenum ACRE_024280 I 0.000
BBA_04574 Beauveria bassiana BBA_04574 I 0.000
CCM_05172 Cordyceps militaris CCM_05172 I 0.000
CFIO01_04298 Colletotrichum fioriniae CFIO01_04298 I 0.000
CFIO01_04448 Colletotrichum fioriniae CFIO01_04448 N 0.000
CGGC5_13803 Colletotrichum gloeosporioides CGGC5_13803 I 0.000
CH063_01773 Colletotrichum higginsianum CH063_01773 I 0.000
CHGG_08120 Chaetomium globosum CHGG_08120 I 0.000
CMQ_3833 Grosmannia clavigera CMQ_3833 I 0.000
Cob_11656 Colletotrichum orbiculare Cob_11656 I 0.000
CTHT_0001980 Chaetomium thermophilum CTHT_0001980 I 0.000
estExt_Genewise1Plus.C_160104 Neurospora discreta estExt_Genewise1Plus.C_160104 I 0.000
F503_03916 Ophiostoma piceae uamh F503_03916 I 0.000
FFUJ_00629 Fusarium fujikuroi FFUJ_00629 I 0.000
fgenesh1_pg.sca_1_chr1_3_0000774 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0000774 I 0.000
fgenesh1_pm.C_scaffold_2000244 Cryphonectria parasitica fgenesh1_pm.C_scaffold_2000244 I 0.000
FGRRES_00967 Fusarium graminearum FGRRES_00967 I 0.000
FOXG_00941 Fusarium oxysporum FOXG_00941 I 0.000
FPSE_01459 Fusarium pseudograminearum FPSE_01459 I 0.000
FVEG_00574 Fusarium verticillioides FVEG_00574 I 0.000
GGTG_10910 Gaeumannomyces graminis GGTG_10910 I 0.000
GLRG_10304 Colletotrichum graminicola GLRG_10304 I 0.000
HMPREF1624_04479 Sporothrix schenckii HMPREF1624_04479 I 0.000
MAC_09429 Metarhizium acridum MAC_09429 I 0.000
MAJ_00507 Metarhizium majus MAJ_00507 I 0.000
MAM_03975 Metarhizium album MAM_03975 I 0.000
MANI_008098 Metarhizium anisopliae MANI_008098 I 0.000
MBR_02161 Metarhizium brunneum MBR_02161 I 0.000
MGG_16161 Magnaporthe oryzae MGG_16161 I 0.000
MGU_04444 Metarhizium guizhouense MGU_04444 I 0.000
MYCTH_2311613 Myceliophthora thermophila MYCTH_2311613 I 0.000
NCU03417 Neurospora crassa NCU03417 D 0.000
NechaG75163 Fusarium solani NechaG75163 I 0.000
NEUTE1DRAFT_123378 Neurospora tetrasperma NEUTE1DRAFT_123378 I 0.000
OCS_03653 Ophiocordyceps sinensis OCS_03653 I 0.000
S40285_02170 Stachybotrys chlorohalonata S40285_02170 I 0.000
S40288_03199 Stachybotrys chartarum S40288_03199 I 0.000
SMAC_08866 Sordaria macrospora SMAC_08866 I 0.000
SPBR_05575 Sporothrix brasiliensis SPBR_05575 I 0.000
THITE_2123319 Thielavia terrestris THITE_2123319 I 0.000
TRIATDRAFT_162437 Trichoderma atroviride TRIATDRAFT_162437 I 0.000
TRIREDRAFT_76039 Trichoderma reesei TRIREDRAFT_76039 I 0.000
TRIVIDRAFT_80282 Trichoderma virens TRIVIDRAFT_80282 I 0.000
UCRPA7_8449 Togninia minima UCRPA7_8449 I 0.000
UV8b_4907 Ustilaginoidea virens UV8b_4907 I 0.000
VDAG_01994 Verticillium dahliae VDAG_01994 I 0.000
VHEMI10654 Torrubiella hemipterigena VHEMI10654 I 0.000
X797_000152 Metarhizium robertsii X797_000152 I 0.000