CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pm.C_scaffold_2000244
(
Cryphonectria parasitica
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
fgenesh1_pm.C_scaffold_2000244
T391435_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU03417
M01422_2.00
Neurospora crassa
NNTCGGNNNH
DNNNCCGANN
PBM
Lambert et al.(2019)
pTH8926
0.621
0.778
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pm.C_scaffold_2000244
Zinc cluster
36
73
LSCLECRRRKLSCDRGYPCERCLKSGTPDRCTYESRPG
Links
Other
Zinc cluster
family TFs
Other
Cryphonectria parasitica
TFs
56 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
UCRPA7_8449
Togninia minima
UCRPA7_8449
I
0.680
CMQ_3833
Grosmannia clavigera
CMQ_3833
I
0.655
F503_03916
Ophiostoma piceae uamh
F503_03916
I
0.655
GGTG_10910
Gaeumannomyces graminis
GGTG_10910
I
0.655
HMPREF1624_04479
Sporothrix schenckii
HMPREF1624_04479
I
0.655
SPBR_05575
Sporothrix brasiliensis
SPBR_05575
I
0.655
CHGG_08120
Chaetomium globosum
CHGG_08120
I
0.646
CTHT_0001980
Chaetomium thermophilum
CTHT_0001980
I
0.646
THITE_2123319
Thielavia terrestris
THITE_2123319
I
0.646
CGGC5_13803
Colletotrichum gloeosporioides
CGGC5_13803
I
0.640
CH063_01773
Colletotrichum higginsianum
CH063_01773
I
0.640
Cob_11656
Colletotrichum orbiculare
Cob_11656
I
0.640
GLRG_10304
Colletotrichum graminicola
GLRG_10304
I
0.640
VDAG_01994
Verticillium dahliae
VDAG_01994
I
0.640
OCS_03653
Ophiocordyceps sinensis
OCS_03653
I
0.632
MYCTH_2311613
Myceliophthora thermophila
MYCTH_2311613
I
0.621
NEUTE1DRAFT_123378
Neurospora tetrasperma
NEUTE1DRAFT_123378
I
0.621
SMAC_08866
Sordaria macrospora
SMAC_08866
I
0.621
estExt_Genewise1Plus.C_160104
Neurospora discreta
estExt_Genewise1Plus.C_160104
I
0.621
NCU03417
Neurospora crassa
NCU03417
D
0.621
PODANS_3_6090
Podospora anserina
PODANS_3_6090
I
0.616
MGG_16161
Magnaporthe oryzae
MGG_16161
I
0.608
CSUB01_10846
Colletotrichum sublineola
CSUB01_10846
I
0.603
S40285_02170
Stachybotrys chlorohalonata
S40285_02170
I
0.595
S40288_03199
Stachybotrys chartarum
S40288_03199
I
0.595
CFIO01_04298
Colletotrichum fioriniae
CFIO01_04298
I
0.593
BBA_04574
Beauveria bassiana
BBA_04574
I
0.587
CCM_05172
Cordyceps militaris
CCM_05172
I
0.587
CPUR_03952
Claviceps purpurea
CPUR_03952
I
0.587
FFUJ_00629
Fusarium fujikuroi
FFUJ_00629
I
0.587
FGRRES_00967
Fusarium graminearum
FGRRES_00967
I
0.587
FOXG_00941
Fusarium oxysporum
FOXG_00941
I
0.587
FPSE_01459
Fusarium pseudograminearum
FPSE_01459
I
0.587
FVEG_00574
Fusarium verticillioides
FVEG_00574
I
0.587
MAC_09429
Metarhizium acridum
MAC_09429
I
0.587
MAJ_00507
Metarhizium majus
MAJ_00507
I
0.587
MAM_03975
Metarhizium album
MAM_03975
I
0.587
MANI_008098
Metarhizium anisopliae
MANI_008098
I
0.587
MBR_02161
Metarhizium brunneum
MBR_02161
I
0.587
MGU_04444
Metarhizium guizhouense
MGU_04444
I
0.587
NechaG75163
Fusarium solani
NechaG75163
I
0.587
TRIATDRAFT_162437
Trichoderma atroviride
TRIATDRAFT_162437
I
0.587
TRIREDRAFT_76039
Trichoderma reesei
TRIREDRAFT_76039
I
0.587
TRIVIDRAFT_80282
Trichoderma virens
TRIVIDRAFT_80282
I
0.587
UV8b_4907
Ustilaginoidea virens
UV8b_4907
I
0.587
VHEMI10654
Torrubiella hemipterigena
VHEMI10654
I
0.587
X797_000152
Metarhizium robertsii
X797_000152
I
0.587
fgenesh1_pg.sca_1_chr1_3_0000774
Nectria haematococca
fgenesh1_pg.sca_1_chr1_3_0000774
I
0.587
ACRE_024280
Acremonium chrysogenum
ACRE_024280
I
0.584
A1O1_05262
Capronia coronata
A1O1_05262
I
0.581
A1O3_09505
Capronia epimyces
A1O3_09505
I
0.580
PV05_05964
Exophiala xenobiotica
PV05_05964
I
0.558
PV08_05947
Exophiala spinifera
PV08_05947
I
0.556
V499_00022
Pseudogymnoascus pannorum
V499_00022
I
0.555
Z518_09480
Rhinocladiella mackenziei
Z518_09480
I
0.555
H072_643
Dactylellina haptotyla
H072_643
N
0.545